Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1428 ATGGCGACTTCGACACTGGGCGGCACCATAGGCTTCTCCCAGCCCTCGTCTTCCTCGCATATCTCAGTTTATTGCATTCCCTTTTCAACCAGCAGATTCAGTTTCTCGAGGACCATTCTTTCTCCTCTTAAGCTTGAAAAACCACCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGAAAAAGGCTGCTGAGGCTTTTCAGGAAGTTTTTCCTCCAGCCCTCACTTCAGCTTCAGAACCACCTCCTCTCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAATTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAGGATAGGCCATCTTGGTACATGGAAAAAGTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATGATAATGAGGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGGCCTTCATTATTTCCTGATGATCCGGGAAAGCGAGAGTTTGCTGAAGAGCTGATAGACTACGTGAACTCTTTCACGAAATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCATTTGACTACATCGAATCTGCTCTTTCAAAATATGGAGATGACCCGTTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTAGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGGAGATGAACAAGATCGAAGGGTACCGAAAAACAAGGGGCGATCCACGGGAACATGTTGATAGCTATAAGAAGCGATTCTTGAGCCGTTTGTGA 894 43.29 MATSTLGGTIGFSQPSSSSHISVYCIPFSTSRFSFSRTILSPLKLEKPPSGRRARAVIAVKKAAEAFQEVFPPALTSASEPPPLFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYMEKVYPPNKVPALEHDNEVKGESLDLIKYIDSNFEGPSLFPDDPGKREFAEELIDYVNSFTKSVVSSFKGDGNEADVAFDYIESALSKYGDDPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIEEMNKIEGYRKTRGDPREHVDSYKKRFLSRL 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27045186 27050037 + CaPI482276_02g014280.1 Cam02g1428 121170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1428 297 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
Cam02g1428 297 FunFam Lambda class glutathione S-transferase 166 296 - -
Cam02g1428 297 PANTHER GLUTATHIONE S-TRANSFERASE L1 65 296 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
Cam02g1428 297 CDD GST_C_Lambda 173 290 - -
Cam02g1428 297 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Cam02g1428 297 SUPERFAMILY Thioredoxin-like 78 169 IPR036249 -
Cam02g1428 297 SFLD Glutathione Transferase (cytosolic) 90 271 IPR040079 -
Cam02g1428 297 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Cam02g1428 297 Gene3D Glutaredoxin 62 165 - -
Cam02g1428 297 Gene3D - 166 297 - -
Cam02g1428 297 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Cam02g1428 297 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Cam02g1428 297 SFLD Main (cytGST) 90 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1428 Cam-Chr2:27045186 Cam10g2034 Cam-Chr10:34191771 1.60E-82 dispersed
Cam10g2033 Cam-Chr10:34166678 Cam02g1428 Cam-Chr2:27045186 1.20E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1428 K00799 - csv:101220995 513.842