Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1431 TTTGATGATGCCTGGATTATTTACTCTGTCACAAACTTTAGTCAATTCCATTCTACTGATGAAAAATTGATGGTAAAGCCGACATTTAATGGGAAGAACGAGGCTCTGAAAGATGGAGGTTCTGATCAAATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTGGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGTGATCAAAGACTTCTGGTTTATGAATACATGCCATTGGGATCATTGGAAGACCATTTACATGATCTCCCACCTGATAAAAGACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTTTCCGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACATATGGATACTGTGCTCCTGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTACTTGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCTCAACCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACAGCCCTTTCATATCTTGCTTCCCAAAAATACAACCCCGAAACTCAGCCAGTTCAAAGCGCTCGCAATAGCTCCTCTACTCCCAGGATCAGCAGGGCCACATTAACCAAAGGAAAGATCACTGTGTTTTGCTATCTTCTTCTTCCTCGCTCTGCTCCGCCTGTCGCCGCCCTAAAATCGCGAACCATAATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCTTTTCTTCTCGTCACTCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGAAGTGGGAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTTTACGTGGACATTGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACAGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAGCCAGTTGGAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGA 1974 43.06 FDDAWIIYSVTNFSQFHSTDEKLMVKPTFNGKNEALKDGGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKRRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALSYLASQKYNPETQPVQSARNSSSTPRISRATLTKGKITVFCYLLLPRSAPPVAALKSRTIMDRLTSNLLDEAIGFDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSRHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVNALIQENKRHVTIVIDDIPLLEVAANGSINHVLDFLHYCHTLTSEIGCSIIALNHEDVYVDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDKLRNRVHNFHFYIKENGTEFFYSGSRA 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27090637 27101814 + CaPI482276_02g014310.1 Cam02g1431 121173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1431 657 SUPERFAMILY Protein kinase-like (PK-like) 51 359 IPR011009 -
Cam02g1431 657 FunFam Serine/threonine-protein kinase PBS1 140 355 - -
Cam02g1431 657 Pfam Elongation complex protein 6 422 644 IPR018627 GO:0002098(InterPro)|GO:0033588(InterPro)
Cam02g1431 657 FunFam Serine/threonine-protein kinase PBS1 34 139 - -
Cam02g1431 657 Gene3D - 416 653 IPR027417 -
Cam02g1431 657 CDD STKc_IRAK 69 337 - -
Cam02g1431 657 Gene3D Phosphorylase Kinase; domain 1 36 139 - -
Cam02g1431 657 SMART serkin_6 63 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1431 657 CDD Elp6 424 652 - -
Cam02g1431 657 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524(InterPro)
Cam02g1431 657 PANTHER OS07G0668900 PROTEIN 32 360 - -
Cam02g1431 657 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1431 657 Gene3D Transferase(Phosphotransferase) domain 1 140 361 - -
Cam02g1431 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1431 657 Pfam Protein tyrosine and serine/threonine kinase 67 283 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1431 Cam-Chr2:27090637 Cam05g0685 Cam-Chr5:5961838 1.90E-160 dispersed
Cam10g2032 Cam-Chr10:34163794 Cam02g1431 Cam-Chr2:27090637 1.50E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84969 PF07714 PK_Tyr_Ser-Thr 7.80E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1431 - - - 0.0