Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1431 | TTTGATGATGCCTGGATTATTTACTCTGTCACAAACTTTAGTCAATTCCATTCTACTGATGAAAAATTGATGGTAAAGCCGACATTTAATGGGAAGAACGAGGCTCTGAAAGATGGAGGTTCTGATCAAATTGCAGCACAAACAATTACATTCTCATTCCGAGAGTTGGCAGCTGCAACAAAGTATTTTAGAGCCGACTGTCTTTTGGGTGAAGGAGGTTTTGGTCAAGTTTATAAAGGACGATTGGAGAGCATAAATCAGGTAGTTGCCATCAAGCAACTTGATCGAAATGGGCTACAAGGAAACAGGGAATTTCTCGTTGAAGTACTAATGTTAAGCCTACTCCATCACCCAAATCTTGTTAATTTAATTGGCTATTGTGCGGATGGTGATCAAAGACTTCTGGTTTATGAATACATGCCATTGGGATCATTGGAAGACCATTTACATGATCTCCCACCTGATAAAAGACGACTTGACTGGAATACAAGAATGAAAATAGCTGCTGGTGCTGCAAAGGGCTTAGAGTATTTGCATGACAAAGCTAACCCCCCAGTTATATATCGTGATCTGAAATGCTCTAACATCCTGCTTGGTGAAGATTACCATCCTAAGCTTTCCGATTTTGGCTTGGCAAAATTAGGCCCCGTGGGGGATAACACTCATGTGTCCACAAGAGTGATGGGAACATATGGATACTGTGCTCCTGAGTATGCAATGACAGGCCAGCTCACTTTAAAATCAGATGTTTATAGCTTTGGAGTTGTTCTACTTGAAATTATTACTGGGAGAAAAGCTATTGACAATTCAAGAGCCGCAGGGGAACATAATTTGGTGGCATGGGCTCAACCCTTATTTAAAGACAGAAGGAAATTTTCGCAGATGGCCGATCCATTGCTCCAAGGACAATACCCAGTCAGAGGCTTATATCAAGCTCTTGCAGTAGCTGCAATGTGTGTTCAGGAACAGCCTCATATGCGACCCCTTATTGCTGATGTTGTCACAGCCCTTTCATATCTTGCTTCCCAAAAATACAACCCCGAAACTCAGCCAGTTCAAAGCGCTCGCAATAGCTCCTCTACTCCCAGGATCAGCAGGGCCACATTAACCAAAGGAAAGATCACTGTGTTTTGCTATCTTCTTCTTCCTCGCTCTGCTCCGCCTGTCGCCGCCCTAAAATCGCGAACCATAATGGACCGATTGACTTCGAATTTGCTTGATGAAGCTATAGGTTTTGATGATCCCACTAAGCCCTCCCCTCTGATCGGCCGTCTGTTGCTCGTCGAGGATTGCGTTGAAACAAGCGGTGCTTTTGTTCTTCATCACCTTCTCAAGCGCGCCTTTTCTTCTCGTCACTCGTCCAATGCCGTCATCTTCATTGCATTCTCTCAGTCCTTCGTCCATTACGACCGCGTGCTCAGGAAACTGGGGTGTAATTTAGCTGCTCAAAGGGACAGCGGTAGGTTCGTTTTCTTTGACATGCTTACGCTGGGCTGTTCAGATAGAAGTGGGAAGGAAACTGATGAAGGTGTTCTTGTTGGGCTGTACTGCAAAATTCAAAGAGCTGTTAATGCTTTAATTCAAGAGAACAAAAGGCATGTCACCATTGTGATTGATGATATACCTCTTTTGGAGGTTGCTGCCAATGGTTCTATAAATCATGTCTTAGACTTCCTTCATTATTGCCACACTTTAACATCAGAAATTGGTTGTTCCATAATTGCACTTAATCACGAAGATGTTTACGTGGACATTGAAAGGCCACTGATTCTACAGATGGAATACCTTGCTGACGTTTTGATAAAAGTAGGACCACTAGCCACAGGTATAGCAAAGGACGTTCATGGGCAGCTGACAGTTTTGAACAAGCCAGTTGGAGGTCTGCAAGACAAGTTGAGAAACAGAGTGCATAATTTTCACTTTTACATCAAGGAAAATGGTACTGAATTTTTTTATTCTGGAAGCAGAGCTTGA | 1974 | 43.06 | FDDAWIIYSVTNFSQFHSTDEKLMVKPTFNGKNEALKDGGSDQIAAQTITFSFRELAAATKYFRADCLLGEGGFGQVYKGRLESINQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKRRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEDYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSRAAGEHNLVAWAQPLFKDRRKFSQMADPLLQGQYPVRGLYQALAVAAMCVQEQPHMRPLIADVVTALSYLASQKYNPETQPVQSARNSSSTPRISRATLTKGKITVFCYLLLPRSAPPVAALKSRTIMDRLTSNLLDEAIGFDDPTKPSPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSRHSSNAVIFIAFSQSFVHYDRVLRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETDEGVLVGLYCKIQRAVNALIQENKRHVTIVIDDIPLLEVAANGSINHVLDFLHYCHTLTSEIGCSIIALNHEDVYVDIERPLILQMEYLADVLIKVGPLATGIAKDVHGQLTVLNKPVGGLQDKLRNRVHNFHFYIKENGTEFFYSGSRA | 657 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 27090637 | 27101814 | + | CaPI482276_02g014310.1 | Cam02g1431 | 121173 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1431 | 657 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 359 | IPR011009 | - | |
Cam02g1431 | 657 | FunFam | Serine/threonine-protein kinase PBS1 | 140 | 355 | - | - | |
Cam02g1431 | 657 | Pfam | Elongation complex protein 6 | 422 | 644 | IPR018627 | GO:0002098(InterPro)|GO:0033588(InterPro) | |
Cam02g1431 | 657 | FunFam | Serine/threonine-protein kinase PBS1 | 34 | 139 | - | - | |
Cam02g1431 | 657 | Gene3D | - | 416 | 653 | IPR027417 | - | |
Cam02g1431 | 657 | CDD | STKc_IRAK | 69 | 337 | - | - | |
Cam02g1431 | 657 | Gene3D | Phosphorylase Kinase; domain 1 | 36 | 139 | - | - | |
Cam02g1431 | 657 | SMART | serkin_6 | 63 | 340 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1431 | 657 | CDD | Elp6 | 424 | 652 | - | - | |
Cam02g1431 | 657 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524(InterPro) | |
Cam02g1431 | 657 | PANTHER | OS07G0668900 PROTEIN | 32 | 360 | - | - | |
Cam02g1431 | 657 | ProSiteProfiles | Protein kinase domain profile. | 63 | 340 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1431 | 657 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 361 | - | - | |
Cam02g1431 | 657 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 186 | 198 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam02g1431 | 657 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 283 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1431 | Cam-Chr2:27090637 | Cam05g0685 | Cam-Chr5:5961838 | 1.90E-160 | dispersed | |
Cam10g2032 | Cam-Chr10:34163794 | Cam02g1431 | Cam-Chr2:27090637 | 1.50E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84969 | PF07714 | PK_Tyr_Ser-Thr | 7.80E-46 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1431 | - | - | - | 0.0 |