Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1446 ATGTCTTCTTCCTCCACCGCCACCAATTTTGCTTCCCCACCCACTTCTCAGCCCTCCTCTCCTCCTCCGCCTGCCGTCGTCCTCAGCCCCTGCGCCGCCTGTAAAATCCTCCGCCGCCGCTGCGTCGAGAAATGTGTTTTGGCTCCATATTTCCCTCCCACTGAGCCTCTTAAGTTCACCATTGCCCATAGAGTTTTTGGTGCTAGCAATATCATCAAGTTCTTGCAAGAGCTTCCAGAGTCTCAAAGAACAGATGCAGTGAGCAGTATGGTATACGAAGCAAATGCTCGACTACGAGATCCAGTTTATGGTAGTGCGGGTGCGATTTGTCAGCTGCAAAAGCAAGTGAGTGAGTTGCAAGCTCAACTAGCCAAGGCTAGGGCAGAGGTGGCCAACATGCAACAACAACAAGCCAACTTACTAGCCTTAATTTGCATGGAAATGAGGCAGTCACCAGAACCCGTTTGGCCGCCGCAGCTCATTGACACTGCATGTTTCCTCGACGATGCCACCCTTAGCTCGCCGTGGGAGCCACTTTGGACATGA 546 52.38 MSSSSTATNFASPPTSQPSSPPPPAVVLSPCAACKILRRRCVEKCVLAPYFPPTEPLKFTIAHRVFGASNIIKFLQELPESQRTDAVSSMVYEANARLRDPVYGSAGAICQLQKQVSELQAQLAKARAEVANMQQQQANLLALICMEMRQSPEPVWPPQLIDTACFLDDATLSSPWEPLWT 181
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27333997 27335188 + CaPI482276_02g014460.1 Cam02g1446 121188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1446 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 139 - -
Cam02g1446 181 Pfam Lateral organ boundaries (LOB) domain 30 127 IPR004883 -
Cam02g1446 181 Coils Coil 109 143 - -
Cam02g1446 181 ProSiteProfiles LOB domain profile. 29 130 IPR004883 -
Cam02g1446 181 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1446 Cam-Chr2:27333997 Cam03g0244 Cam-Chr3:3559117 2.10E-50 dispersed
Cam02g1446 Cam-Chr2:27333997 Cam02g2159 Cam-Chr2:34387261 4.30E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51517 PF03195 LOB 1.30E-40 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1446 - - - 0.0