Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1528 ATGGCTACCAATAATCTAAACAAAGAGCTGTCAAAGAAAACAAACATATTTGGACTAAAAGTATGGGAAGTGATTGGAATTGGAGTAGGCCTATTCATAATCTCAATCCTCTGTATACTCTCACTATGTTTAACCTCATTCAACAAGAAGTCAAAAAAATCATCATCATCATCACCCAACTCCAACACCTTATTCCCTCTCACTCAAATCCCATCTCATTCAAAAGACATAAAGGCAGTTCACATAACAACTACTCACAAAAAGCCAACAACTCAAATGGGAAAATTTGAAACCAATAATAATTACAGCAGTGAATCGGGATCATTGTTTCAACCATTGGGTTATGGCTATGGATCACAATCAGGGGATGAAGGCAGCTCGGGCACCATCACGACGACAACAATGTACCGACGTTCGACGTCGCCTACTACGACGACGGCTCCTTCGCCGTTGTCGTGTATGCCGGAGATGTCGCAATTGGGGTGGGGGTATTGGTTTACTTTGAGAGAGCTGGATTTGGCTACTAATTTGTTCTCAGAAGAGAATTTGATTGGAGAAGGAGGGTATGGAGTTGTGTTTAGAGGGAAGTTGTTGAATGGGACACCAGTGGCAGTTAAGAAGATTTTTAATGGACAGGGCCAAGCTGAGAAGGAATTCAGAGCGGAAGTTGAGGCAATTGGGCATGTAAGACATAAGAATCTTGTTCGTCTTTTGGGATATTGCATTGAAGGGACTCACAGGATGCTGGTGTATGAGTATATAAACAATGGAAGCTTAGAGCTATGGCTACATGAAGGAATGGGAGAGAATAGATATCTTACATGGGAGGCTCGAATGAAGATCATGTTGGGGACAGCCAAAGGAATTGCATACTTACACGAAGCCATTGAGCCAAAGGTGGTACATCGAGACATAAAGGCTAGCAACATACTTATAGATGAAAATTTCAATGCTAAAGTATCAGATTTTGGGCTAGCAAAGTTGATGGATGCTGGCAAAACTCATGTCACAACAAGAGTTATGGGTACATTTGGTTATGTGGCTCCTGAATATGCTAACACTGGACTTCTAAATGAGAAGAGCGACGTGTATAGCTTTGGAGTTGTGCTGGTGGAAACAATCACGGGAAGAGATCCAGTGGACTATGGACGTCCGCCCAAACAGGTGAATGTAGTAGATTGGCTGAAAATGATGATTGGAAGTAGAAGATGTGAAGAAGTGGTGGACACAAAATTAGGGGTTGGAGGAAGGCCATCCACAAGAGGGTTGAAAAGAGTTCTATTGGTTGCATTAAGATGTGTGGATCCTGATTATGACAAGAGACCAAAAATGGGCCAAGTTGTTAGAATGCTTGAATCTCAAGATCATCATTATAATTCTTCTCGTACACCTTCTACTACTACTACTACTTAA 1413 41.68 MATNNLNKELSKKTNIFGLKVWEVIGIGVGLFIISILCILSLCLTSFNKKSKKSSSSSPNSNTLFPLTQIPSHSKDIKAVHITTTHKKPTTQMGKFETNNNYSSESGSLFQPLGYGYGSQSGDEGSSGTITTTTMYRRSTSPTTTTAPSPLSCMPEMSQLGWGYWFTLRELDLATNLFSEENLIGEGGYGVVFRGKLLNGTPVAVKKIFNGQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYINNGSLELWLHEGMGENRYLTWEARMKIMLGTAKGIAYLHEAIEPKVVHRDIKASNILIDENFNAKVSDFGLAKLMDAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETITGRDPVDYGRPPKQVNVVDWLKMMIGSRRCEEVVDTKLGVGGRPSTRGLKRVLLVALRCVDPDYDKRPKMGQVVRMLESQDHHYNSSRTPSTTTTT 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28264937 28270052 + CaPI482276_02g015280.1 Cam02g1528 121270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1528 470 SMART serkin_6 178 451 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1528 470 Gene3D Transferase(Phosphotransferase) domain 1 254 466 - -
Cam02g1528 470 FunFam serine/threonine-protein kinase PBS1-like 152 253 - -
Cam02g1528 470 ProSitePatterns Protein kinases ATP-binding region signature. 184 207 IPR017441 GO:0005524(InterPro)
Cam02g1528 470 PANTHER OS01G0323000 PROTEIN 5 462 IPR052232 -
Cam02g1528 470 CDD STKc_IRAK 184 452 - -
Cam02g1528 470 FunFam Putative receptor-like serine/threonine-protein kinase 254 466 - -
Cam02g1528 470 ProSiteProfiles Protein kinase domain profile. 178 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1528 470 Gene3D Phosphorylase Kinase; domain 1 153 253 - -
Cam02g1528 470 Pfam Protein kinase domain 179 387 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1528 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1528 470 MobiDBLite consensus disorder prediction 453 470 - -
Cam02g1528 470 SUPERFAMILY Protein kinase-like (PK-like) 151 456 IPR011009 -
Cam02g1528 470 MobiDBLite consensus disorder prediction 451 470 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1528 Cam-Chr2:28264937 Cam09g2283 Cam-Chr9:37299108 3.60E-150 dispersed
Cam02g1528 Cam-Chr2:28264937 Cam06g0416 Cam-Chr6:6284928 1.70E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84970 PF00069 Pkinase 1.40E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1528 - - - 0.0