Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1534 ATGGAAAAAGGAGATAATATTACAGCATTAATAGGGATGATTGTATTGCAAATATGCTATGCTGGTATAAATATTATCTCAAAGCTTGCCATGCAATCTGGAATGAACCCTCTTGTTCTTCTCACTTATAGACAGATTTTTGGCACTTTGGCCATTGCTCCTTTTGCTTTCTTTACTGAAAGGAAAACAAGGCCAAAGATTACTTTTACAGTTCTGATTCAAATCTTTGCGTGTTCCTTATCAGGAGCAACAGGAAACCAGATATTCTTCTTTGTTGGGTTGAAGTACACAAACCCAACAATTTCGAGTGCTATGGCCAATGTTCTTCCAGCTGCTACTTTTATTCTTGCTGTTCTTTTCAGACAAGAGAGTGTGAAAATCAAGACCAAGTCTGGTTTTGCAAAGGTAATAGGGACAATTGTGTGTGTATGTGGGGCAATGCTGCTGTCTTTCTACCATGGACACACCATTGACTTAGGTGAATCAAAAATTCACTGGCCATATGTTGAGAAAATGATCAAGGAAACAAACCCGGCCAACCATCAAGGAAACCGTGTCCTCGGCTCCATTTTGTTGCTCTTCAGCTCTTTTGCTTGGGCATTATGGTTTGTCATCCAAGCAAGATTGAGTGTGAAGTTCAAAGCTCCCTATACAAGTACTGCATTGTTGTGCTTCATGGCCTTTTTCCAATGTGGACTCATAGCTGTGATTTCAGAGCACAATATTGCTGCTTGGTCTTTGAAAAGTACGATCCGACTCGTTGCAGCTCTTTACGCGGGAGTTGTGTGCTCTGGATTGACATTTAGCATAACTTCATGGATTATACAAAGGAAAGGCCCTCTCTATGTCTCCATTTTCACCCCTTTGTTGCTTATCATTGTGGCCATCGTTAGCTGGACTCTCCTCCATGAACAACTCTACGTGGGAACTGTTATTGGGTCTATTTTGATAATCATTGGGCTTTATGCTGTGCTATGGGGAAAATCCAAAGAGATGAAAGTAGAAGATGATCATGACAACATGGAAAAACAAAGAATAGAGAAGCCAAATGGAAATGGGAGTCATATTATTGAGGAGAAGGATGACATGGAATTGCAAATCACATACATCAAATAA 1116 40.14 MEKGDNITALIGMIVLQICYAGINIISKLAMQSGMNPLVLLTYRQIFGTLAIAPFAFFTERKTRPKITFTVLIQIFACSLSGATGNQIFFFVGLKYTNPTISSAMANVLPAATFILAVLFRQESVKIKTKSGFAKVIGTIVCVCGAMLLSFYHGHTIDLGESKIHWPYVEKMIKETNPANHQGNRVLGSILLLFSSFAWALWFVIQARLSVKFKAPYTSTALLCFMAFFQCGLIAVISEHNIAAWSLKSTIRLVAALYAGVVCSGLTFSITSWIIQRKGPLYVSIFTPLLLIIVAIVSWTLLHEQLYVGTVIGSILIIIGLYAVLWGKSKEMKVEDDHDNMEKQRIEKPNGNGSHIIEEKDDMELQITYIK 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28309157 28312288 + CaPI482276_02g015340.1 Cam02g1534 121276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1534 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Cam02g1534 371 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam02g1534 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 330 - -
Cam02g1534 371 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020(InterPro)
Cam02g1534 371 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0419 Cam-Chr1:4613448 Cam02g1534 Cam-Chr2:28309157 1.20E-33 dispersed
Cam01g1110 Cam-Chr1:16888676 Cam02g1534 Cam-Chr2:28309157 1.60E-117 dispersed
Cam02g1534 Cam-Chr2:28309157 Cam10g1612 Cam-Chr10:29909522 8.00E-68 dispersed
Cam02g1534 Cam-Chr2:28309157 Cam04g0584 Cam-Chr4:19635777 4.50E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1534 - - - 0.0