Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1553 ATGGAATTTGAAGAAGCCTCTCTCTTGCAAAAAGTCTGTGCTCTTTACAACCAAATCTCAAGCCTCGCTAGCCTCGAGCCTTCAAAAAATGTCGACACTCTTTTCACTCAACTCGTCCTCACGTGCTCTCCACCTGCCCCTGGCCTTGATATTGCTTCTTTGTCTCAGCCACTTCAAGCCATGAGGGCTCATCTCATTCGCCTTTGTGCTAAAGCTGAAGCTCTTCTTGAACTTCATTTCTCTTCCATTTTGGCTTCCTCTTTTGATAATCCCATTTCTAACTTGTCTATCTTCCCTTACTACTCTAATTACTTGAAGCTCTCCCTTCTTGAGTTTGATATTCTTCGATCTCATTATTGTCGTGTCCCCGCTACCGTCGCGTTCCTTGGCTCTGGACCCCTCCCGCTCTCCTCCATTGTCTTGGCGTCTATTCATCTTAAGGGAACTATTTTCCACAACTTTGACATTGATCCAGCTGCAAACACCATGGCTAGTCAATTGGTTTGCTCTGACCCAGACTTATCACAAAGAATGATATTCCACACAACAGATGTAATGGAAGTGACAAAGGGATTAAAAGATTATGAAGTAGTTTTCTTAGCAGCATTGGTAGGATTAGAAGAGGAAGAAAAAGGAAGAGTTCTAAGGCATTTGGGGAAACATATGGCAGCTGGTGCTTATTTGATGCTAAGAAGTGCACATGGAGCTAGAGCATTTTTATATCCTGTTGTTGATATTTGTAACGTTGAAGCTTCTGGATTTGAGATTTTATCTGTGTTCCATCCCACTGATGAAGTTATAAACTCTGTTGTTATTGCAAGGAAGAAACTAGTGTTTGATCGAAACTCGATCAAGGATGAGGATGACGACGAGGACGACGAGAAGCGAGGTATATTAGTTAATACCTCATCTATTGTGTTGCCTGAGAAATGCTCTGGGTTTAATGGCTTTAGTCCCATGATTGAAGAGCAACTTTCTTGA 981 42.1 MEFEEASLLQKVCALYNQISSLASLEPSKNVDTLFTQLVLTCSPPAPGLDIASLSQPLQAMRAHLIRLCAKAEALLELHFSSILASSFDNPISNLSIFPYYSNYLKLSLLEFDILRSHYCRVPATVAFLGSGPLPLSSIVLASIHLKGTIFHNFDIDPAANTMASQLVCSDPDLSQRMIFHTTDVMEVTKGLKDYEVVFLAALVGLEEEEKGRVLRHLGKHMAAGAYLMLRSAHGARAFLYPVVDICNVEASGFEILSVFHPTDEVINSVVIARKKLVFDRNSIKDEDDDEDDEKRGILVNTSSIVLPEKCSGFNGFSPMIEEQLS 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28488469 28490128 - CaPI482276_02g015530.1 Cam02g1553 121295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1553 326 Gene3D Vaccinia Virus protein VP39 9 276 IPR029063 -
Cam02g1553 326 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 280 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam02g1553 326 Pfam Nicotianamine synthase protein 5 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam02g1553 326 PANTHER NICOTIANAMINE SYNTHASE 3 4 283 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1553 Cam-Chr2:28488469 Cam06g1467 Cam-Chr6:26088140 1.60E-67 dispersed
Cam02g1553 Cam-Chr2:28488469 Cam02g1554 Cam-Chr2:28502583 1.20E-83 tandem
Cam02g1553 Cam-Chr2:28488469 Cam03g1780 Cam-Chr3:32916765 1.70E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1553 K05953 - csv:101203651 538.88