Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1554 ATGTGTTGCCAAGGTCTTCTTTTGGTTCAAAAAATCTCAGAACTTTACCACAAAATCTCCACTCTTGAAAGCCTCAAACCCTCTAAAGATGTCAACTCTCTCTTCTCTCAACTTGTTCTCATTTGCACCCCTCCCCCGTCTTCTCCGTCGTCCATCGACATCTCGGCGCTTTGCTCCGCCGTCCAAACCATGAGATCCCATCTCATCAAGCTCTGCGCCGAGGCCGAGGCACTTCTCGAGCATCACTACTCCACCATTTTAGCCTCTCACCAAAACCCACTTGACCATCTCTCCCTTTTCCCTTATTACTCCAACTATCTCAAACTAACCCACCTTGAATTCTCCATTTTGAACCACCACGCGCCCCACGCGCCACCCACCAAGGTGGCCTTTGTTGGCTCCGGTGCACTTCCGTTCTCGTCGATAATCATGGCCTCGAAGTACCTTCCAAAAACCGAGTTTCACAACTTCGACGTCGACTCGTCTGCCAATGCGAAAGCAGCAATGCTAGTAGCTGGCGATGCAGACTTGTCGAGGCGGATGGTGTTCCACACGACTAACATCATGGATGTTGTCTCAGACCAGTTGAGGAAATTTGAGGTAGTATTTTTGGCGGCGTTGGTGGGGATGGAGAGGGGAGAGAAGGTGAAAGTGATTGAGCATTTGAGGAAGAATATGGGAGGTGGCGCGTTGTTGATGTTGAGGAGCGCGTATGGTGCACGCGCGTTTCTTTATCCGGTGGTGGAAGCTTGTGATCTTCGAGGGTTTGAGATTCTTACAATGTTTCATCCCACGGATGAAGTTATTAATTCAATTGTGTTGGCACGATTATAA 834 49.16 MCCQGLLLVQKISELYHKISTLESLKPSKDVNSLFSQLVLICTPPPSSPSSIDISALCSAVQTMRSHLIKLCAEAEALLEHHYSTILASHQNPLDHLSLFPYYSNYLKLTHLEFSILNHHAPHAPPTKVAFVGSGALPFSSIIMASKYLPKTEFHNFDVDSSANAKAAMLVAGDADLSRRMVFHTTNIMDVVSDQLRKFEVVFLAALVGMERGEKVKVIEHLRKNMGGGALLMLRSAYGARAFLYPVVEACDLRGFEILTMFHPTDEVINSIVLARL 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28502583 28503416 - CaPI482276_02g015540.1 Cam02g1554 121296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1554 277 PANTHER NICOTIANAMINE SYNTHASE 3 8 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam02g1554 277 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cam02g1554 277 Gene3D Vaccinia Virus protein VP39 4 277 IPR029063 -
Cam02g1554 277 Pfam Nicotianamine synthase protein 7 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1554 Cam-Chr2:28502583 Cam03g1780 Cam-Chr3:32916765 5.00E-83 dispersed
Cam02g1553 Cam-Chr2:28488469 Cam02g1554 Cam-Chr2:28502583 1.20E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1554 K05953 - csv:101219339 471.47