Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1564 ATGGGAGGTTTGAGTGAGGGTCTAACACAGTTGCTGATACCTGCTGCTGCTCTGCTTGGTATTGGATTTGCCCTTCTTCAATGGCTTTTGGTTTCAAGAGTTAAGGTTTCTAGCTACCCTGATGATGAAAGCCAAGAAAACAACTTGATTGAAGGAGGACAAGAGGAAGGTATTGATGATGTCGAGGTTGTCGCAAAGTGTGCCGAAATCCAGAAGGCAATTTCTGTTGGAGCAACCTCATTTTTATTCACCCAGTATAAATACCTTGTTGTCTTCATGGGAGTATTTGGAGCCATCATTTTTCTGTTTCTTGGTTCTGTTAAGAGATTCAGCACCAAAAGTGAACCTTGCACATACAACAAGGGACAGATGTGTAAACCAGCTCTAGCCAATGCCATTTTTAGCACAATTGCCTTCTTGCTAGGTGCTCTCACCTCAGTTCTATCTGGTTTCCTTGGAATGAAGATTGCAACTTATGCCAATGCACGAACGAGTCTAGAAGCACGGAAAGGCATTGGAAGAGCATTCGTTATTGCTTTTCGCTCCGGTGCTGTGATGGGATTCCTTCTAGCTGCCAATGGCCTCCTTGTTTTATATGCCTCCATCAATTTGTTTAAGCTGTATTATGGCGATGATTGGGAAGGACTGTACGAATCTATCACCGGCTACGGTCTTGGAGGTTCTTCAATGGCGCTTTTTGGAAGAGTTGGGGGCGGCATATACACAAAAGCAGCTGATGTTGGAGCTGATCTTGTAGGGAAAATTGAAAAGAATATTCCTGAAGACGATCCACGAAATCCTGCTGTCATAGCTGACAATGTGGGTGACAATGTAGGAGATATTGCAGGAATGGGATCTGACTTATTTGGATCTTATGCAGAATCAACCTGTGCTGCACTTTTCGTGGCATCGATATCGTCCTTCGGCTCTACACATAATTATGCAGCCATGTCCTACCCTCTACTTGTAAGCTCAATGGGAATTGTGATTTGCTTAATAACTACACTTTTTGCAACTGACCTCATTGAGATTAAGAAAGTGAGCGAAATCGAACCGTCATTAAAACGACAACTTCTTATCTCCACCGTGCTGATGACAGTAGGGGTAGCTTTAGTTAGCTTCATTGCTTTGCCTTCAAAATTCACTCTTTACGATTTCGGCATCGATAAGGTCGTAAAGAACTGGCACATTTTCTTTTGTGTGGTGACAGGATTGTGGGCAGGACTTGTTATTGGGTACACAACTGAGTATTACACTAGCAATGCTTACAGTCCAGTGCAGGATGTGGCTGATTCTTGCAGAACCGGTGCCGCAACGAATGTAATATTTGGATTAGCTCTCGGTTACAAATCCGTCATCATTCCCATATTTTCAATCGCTTTATCCATTTACGTGAGCTTCCGCTTGGGAGCCATGTATGGTATTGCAATGGCTGCTTTGGGAATGCTTAGCACCATTGCCACTGGTCTAGCCATTGATGCTTATGGTCCAATAAGTGACAATGCAGGTGGAATAGCCGAAATGGCTGGAATGAGCCACGAGATACGCGAAAGAACCGATGCTTTAGATGCTGCAGGAAACACAACTGCAGCCATCGGAAAGGGCTTTGCCATTGGATCAGCTGCTCTTGTTTCCCTCGCCTTGTTCGGCGCCTTCGTGAGCCGAGCAGGCATCGAAACAGTCAACGTCATGAACCCGAAAGTCTTCATTGGGTTGATAGTAGGTGCAATGCTTCCATACTGGTTTTCAGCCATGACAATGAAGAGTGTTGGGAGTGCAGCACTGAAGATGGTGGAGGAAGTTCGACGACAATTCAACTCCATCCCAGGGCTGATGGAAGGCAGGACGAAGCCGGACTATGCAAATTGTGTGAGGATATCGACCGATGCTTCGCTTAGGGAGATGATCCCACCTGGTGCTCTTGTTTTGGTAACACCACTCATTGCTGGAACATTCTTTGGAGTTGAAACTCTTGCTGGACTTCTGGCTGGTTCCCTTGTTTCTGGAGTGCAGGTTGCTATCTCTGCTTCAAACACAGGTGGGGCTTGGGATAATGCAAAAAAGTACATAGAGGCAGGAAGAAGTGAACATGCTAAAGCACTTGGTCCTAAAGGGTCAGATGCTCACAAGGCAGCTGTGATAGGGGACACAATTGGGGATCCTCTCAAAGACACTTCTGGCCCATCACTTAATATTCTCATCAAGCTTATGGCTGTTGAGTCTTTGGTTTTTGCCCCTTTTTTTGCTGCTCATGGTGGCCTCATCTTCAACCATATATAA 2280 45.22 MGGLSEGLTQLLIPAAALLGIGFALLQWLLVSRVKVSSYPDDESQENNLIEGGQEEGIDDVEVVAKCAEIQKAISVGATSFLFTQYKYLVVFMGVFGAIIFLFLGSVKRFSTKSEPCTYNKGQMCKPALANAIFSTIAFLLGALTSVLSGFLGMKIATYANARTSLEARKGIGRAFVIAFRSGAVMGFLLAANGLLVLYASINLFKLYYGDDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIEKNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESTCAALFVASISSFGSTHNYAAMSYPLLVSSMGIVICLITTLFATDLIEIKKVSEIEPSLKRQLLISTVLMTVGVALVSFIALPSKFTLYDFGIDKVVKNWHIFFCVVTGLWAGLVIGYTTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFSIALSIYVSFRLGAMYGIAMAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIETVNVMNPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNSIPGLMEGRTKPDYANCVRISTDASLREMIPPGALVLVTPLIAGTFFGVETLAGLLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGRSEHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFNHI 759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28559586 28565522 + CaPI482276_02g015640.1 Cam02g1564 121306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1564 759 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 749 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam02g1564 759 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 12 756 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam02g1564 759 Pfam Inorganic H+ pyrophosphatase 48 744 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam02g1564 759 PIRSF H+-PPtase 18 757 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cam02g1564 759 NCBIfam V-type H(+)-translocating pyrophosphatase 9 754 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1564 Cam-Chr2:28559586 Cam06g1302 Cam-Chr6:24517065 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1564 K23025 - csv:101205277 1429.08