Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1581 ATGGGGCATTTCTCTACCATGTTTAATGGGCTGGCAAGGTCATTTTCCTTCAAGAAAGGTAGAAATTCTGGGAGTCTAGGCAACGAGGGAGGGCAAGAAGCTGCAAAAGCCATGATAAAGGATGCAAAAAGGAAAGACTCGATATTATGCACCTCCGGTGTACTCAATGCAGAAGGTTCGGATACTTTTGCTTCAGTGTTCTCGAAGAAAGGCGAAAAAGGAGTAAACCAAGATTGCTGCATTGTATGGGAGGAATTTGGATGCCAAGAAGACATGATATTTTGTGGGATTTTCGATGGGCACGGACCATGGGGTCACTTTGTTGCAAAGACGGTAAGAGAATCATTGCCGCCTTCTTTGCTGTGCCATTGGCAGCAAGGACTTGCTCAAGCTTTTCTTGACCCAGAATTGGATTCAGAAAAGAAGCATCAGCGATTTGATATATGGAAGCATTCTTATTTAAGAACTTGTGCTGCCATTGATCACGAACTCGAGCGGCACCGTAAAATCGATACATTTTACAGTGGAACAACTGCCCTGTCCATTGTTAAACAGGGCGAACTGGTCGTTTTGGCCAACGTAGGTGACTCCCGAGCGGTTTTAGCTACTACTTCAGATGATGGAAGTATAGTACCGGTTCAGCTCACCGTTGATTTCAAACCAAACCTACCTCAGGAGGCTGAGCGGATAATTCAATGCAATGGGAGGGTATTTTGTTTAAGTGACGAGCCGGGAGTTCATAGGGTCTGGCTTCCCAACGAGGAAACCCCCGGATTGGCGATGTCGAGAGCCTTCGGTGATTATTGTATTAAAGAATTCGGACTCATTTCTGTGCCAGAAGTAACACATAGAAGTATAACCAGCAGAGACCAATTCATTATATTGGCCACTGATGGGGTATGGGATGTTGTCACCAACCAAGAAGCAGTGGAGATTGTATCGTCAACACCGAATCGAGCGAAATCGTCGAAACGTCTGGTCGAGTGTGCTGTTCGGGCATGGAAACGGAAGAGACGAGGCATTGCAATGGATGATATATCAGCTATCTGTCTCTTCTTCCACTCCTCATCAGAGCAAGATGATCACCTTGTATCCACACTATAG 1104 45.65 MGHFSTMFNGLARSFSFKKGRNSGSLGNEGGQEAAKAMIKDAKRKDSILCTSGVLNAEGSDTFASVFSKKGEKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKTVRESLPPSLLCHWQQGLAQAFLDPELDSEKKHQRFDIWKHSYLRTCAAIDHELERHRKIDTFYSGTTALSIVKQGELVVLANVGDSRAVLATTSDDGSIVPVQLTVDFKPNLPQEAERIIQCNGRVFCLSDEPGVHRVWLPNEETPGLAMSRAFGDYCIKEFGLISVPEVTHRSITSRDQFIILATDGVWDVVTNQEAVEIVSSTPNRAKSSKRLVECAVRAWKRKRRGIAMDDISAICLFFHSSSEQDDHLVSTL 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28721974 28723773 - CaPI482276_02g015810.1 Cam02g1581 121323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1581 367 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Cam02g1581 367 SMART PP2C_4 52 351 IPR001932 -
Cam02g1581 367 CDD PP2Cc 63 353 IPR001932 -
Cam02g1581 367 Gene3D - 50 356 IPR036457 -
Cam02g1581 367 SUPERFAMILY PP2C-like 59 354 IPR036457 -
Cam02g1581 367 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g1581 367 FunFam Probable protein phosphatase 2C 34 54 355 - -
Cam02g1581 367 Pfam Protein phosphatase 2C 87 328 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1581 Cam-Chr2:28721974 Cam11g0973 Cam-Chr11:16193590 1.70E-94 dispersed
Cam03g1768 Cam-Chr3:32753353 Cam02g1581 Cam-Chr2:28721974 9.30E-141 transposed
Cam02g1581 Cam-Chr2:28721974 Cam06g0487 Cam-Chr6:6979581 6.20E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1581 - - - 0.0