Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1682 ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAGCACTGGGCAGGGCGGTTCGATCTGTGGCCATTTGCCATTCTTTATGCGGCCTGGCTTGCCGTTGTTGTTCCTAGTATAGACTTTGGGGATGCTTTCATTGTTTTAGGTGGACTTGCGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGCTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGTCAGGTTAATGATATTTACCGTGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAAATTGTTTCACTTCATTTTCGTAAGCTTCTGGCAGGTTCTGCGTCTGCACTTGACCTTGAGGAGATCTACTTTGATTTCAGAAAACAACGATTTATTTATTCAAAGGAGAAGGAGACATTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAATACTGGCTATGGGTCCGAGCCTAAAGTTGTAGCTGCTGTTGAAAAATGGGGGCGCAATATATTCGAGTATCCACAACCTACGTTTCAGAAATTAATGAAGGAGCAGTGTATGGAACCATTTTTTGTGTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACTCTGTTTATGCTGTTCATGTTTGAGTCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCACCGTTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCAGGAGATGTTGTCTCCATAGGGCGTGATTCTGGTCAGAGTGGTGAAGATAAATCCGTACCTGCTGATATGCTTATTTTGGCTGGAAGTACTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAATAACTGGGAGAGGAATTGAGGAGAAGTTATCAGCTAAGAGAGACAAGAGTCATGTGTTATTTGGTGGGACCAAAATACTCCAGCATACTCCGGATAAGACCTTTCCTCTTAGAACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGCGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGCACAATTTTATTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCCTATTTATTTTGTTCTTAGTTGTATTTGCAGTTATAGCTGCTGGTTACGTACTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACCTCTGTTATTCCTCCTGAACTACCAATGGAACTGTCAATAGCAGTTAATACATCGTTAATTGCTCTAGCACGCCGTGGAATATTTTGTACAGAGCCTTTCCGGATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTCGATAAAACTGGAACATTGACATCAGATGACATGGAGTTTCGAGGAGTAGTTGGGTTGAGTGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGTCTTTGCGTACAGTCGAAATTCTGGCTTCTTGTCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCTCTCAAGGGAGTTGATTGGATTTACAAATCTGATGAAAAAGCGATTCCCAGAAAGGGAAGTGGCCACGCTGTCCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGTGCCCCCGAAACCATCCAGGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACATATAAGAAATATACACGACAAGGTTCCCGAGTCCTTGCCCTTGCTTATAAGTCACTTCCAGACATGACAGTTAGTGAAGCTAGAGGCCTGGATAGGGACACGGTAGAGAGTGACCTGACATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCAGATTCGGCTACAGTATTATCTGAGCTTAAAGGGTCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACAGCGTGCCATGTTGCTAGCCAAGTTCATATTACATCAAAGCAGATTTTAATTCTCAATTCAATGAAGGGAACTGAGGAATATGAATGGCTTTCCCCAGATGAGTCACAGACAGTTCCCTACAGAGAGAAAGAGGTGGGAACTTTATCGGAGACATATGATCTTTGTATTGGAGGTGACTGCATCGCAATGCTACAACGCACCTCTACTGTGCTGGATGTTATTCCATATGTTAAGGTTTTTGCAAGAGTTGCTCCTGAGCAGAAAGAACTCATTTTGACAACTTTCAAAACAGTTGGAAGAATGACGTTAATGTGTGGGGATGGAACGAACGATGTTGGAGCTTTGAAGCAGGCCCATGTAGGAATTGCTCTCCTAAACGCAGTCCCTCCTCCTCAAAGTGGCAACTCTTCTTCAGAAGCATCAAAAGATGAGGCTGTACGGTCTGCAAAGTCAAAGAAATCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTGTAAGTGGAGAAGGTTCTTCAAAAAGCAAAGGTGGTGCAAAACTGGATTCTGCTGCTGAGCAAGCAAGTAACCGTCCACGGACACCTGCAGAGATGCAAAGACAGAAGCTAAAGAAACTTATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCTGCCCCTATTGTCAAGCTTGGAGATGCATCCATGGCATCACCATTCACCGCAAAGCATGCCTCTGTTGCTCCTACTACTGACATTATTCGCCAAGGCCGAAGTACTCTAGTGACAACTCTACAGATGTTCAAAATACTCGGTCTCAACTGCCTCGCTACTGCCTACGTACTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGATATTCAAGCCACTATCAGTGGAGTATTCACAGCAGCCTTTTTTCTCTTCATCTCACATGCGCGGCCCCTTCCAACACTCTCAGCTGAACGCCCCCATCCACACATCTTTTGCTCTTACGTGCTCCTTTCTCTGTTGGGCCAATTTGCAATCCACTTATGTTTCTTGATTTCTTCGGTTAAAGAAGCTGAAAAGCACATGCCTGATGAATGTATAGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACGGTTTCATACATGGTAAGCATGATGCTTCAGGTGGCAACCTTTGCTGTAAACTACATGGGTCATCCCTTCAACCAGAGTGTATCCGAAAACAAGCCGTTCTTATACGCCCTCTTGGCTGCAGTTGGTTTTTTCACCGTTATTACCTCTGATTTGTTTAGAGATCTCAATGACTGGCTGAAACTTGTTCCATTGCCTGTGGGAATGAGGGATAAGCTTCTGGCTTGGGCACTTCTTATGTTCTTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATTTATGTTCCCAGGTAAAATCCCAGCATGGCGGAAGCGACAACGACTGGTGGCTGCTAATCTGGAGAAGAAGAAACAGTGGAGGGAACGCGAAAGCCCTATCTTTTCTAGATTGTTCATCGTTTCCAGATTATCGGTTCTCTTCTCAGTTCGCTCTCTAGTTTCGTCGGCTTCCCAGATCATGAAACAAGATTCAAATATGGAAGCAAATTCTGCTTTGCTTGAATGTGAGAAGGAAGTAGGTATATCTAATGTACAGGAAGCTGGGGGGAATGTAGAAGAGTTCTCAATTGAACACGAAGGTAAGAGGAAAGAAGCAGGGTCTTCGGCAGTTCAAGAAGATAGCATAATGAAAGAAGACTTTCCCGCAGAACAAGCAGATGACATGAAAGAAGCCGTAGCTGAAGTTAGGAACACTGTTGAAGTTGGGAAGTCGGATGAAAAGTTCATTGAAGAAGGGTTGCGTAAAAGGAAAATTGTAAAAGTTTTGAAGGTCAAAAAGAAAATTATAAAGAAATCCCCAGCTAGCGGTGTGTTGAAGAGAAAAAAGGCGCAAGTTGAACAGGAAGATGACAAAAAGGAAAAAGTGGTTCGTGTAGCTCAAAGGGAAGAGACACAGGTTGAACAAGAAGATGACAAAAAGGAAAAAGAGGTTCCTGTAGCTCAAGAGGTGGAAGAAACACTTGAACCCCAGAATCCCACCGAAAATTCCAAACTAGAGTCAAAGGTTCCTATAGATCAAGAAGTGGAAGAAACAGCTCAACCTCAGAATCCCATTGAAAATTCCAAACTAGAGTCAAAGGCGAAGAAGACTAACAATGTTTTGAAGGTCAAAAGGAAAATTGTAAAGAAATCTCTGGCCAACAGTCAAAAGAAGACTAATAATCTTCAGAGTAGTCCTAAGGTGCAGGTTAGAAAGAAAGTGGAGAATAGTAGGAGTTCGTTGCAGGAAAATGGGGAAGGTAGTGAAAAGAAGGTAGAGGATACGGAGAAGCCTAACCAAAAGGAAAATGTTAAAAAAAGTATCTCAAAAGAGGAGCATATCGAAAAGGGAGAAGAGACTTCTAATAGTCATAAACACAAGTTTGAGTCTAAAAATAGCATAAAAGAAGGGAAAGTCATGGAGAAGGTCGGTTCTTCAGATAAGAGCACAAAGAATCAGAATAAGAAAGAAGAGGATAGAGAGAAAAAGAGTCAAAGAGAAGATAAACATAAAGAAAATCTTGGAGGACTGATTTTCATGTGCAGTGCAAAAACGAAGCCGGATTGTTTTAACTACAATGTAATGGGTGTTTCTGCCGGCAAAAAGGATGTTGTCTTGGCAATTAAACCTGGGTTGAAGCTCTTTCTCTATGATTTTGATCTCAGGCTTCTGTATGGGATTTATAAAGCATCCTCTTCCGGTGGCATGAAACTTGAGCCAAAGGCTTTTAATGGGGCTTTCCCTGCTCAGGTGCGGTTCAATATTTACAAGGATTGTTTTCCACTACCTGAAAGTATTTTCAAGAAGGCTATCCAAGAGAACTATTATGAGAAGCACAAGTTCAAAGTTGAACTCACGGTTAAACAGGTTAGGAAGCTCTCAGATCTTTTTCGACCAATTGGACTCCACCCGAGTTCTGCTCTTGTTCGGTCCCATGCGGAGGTACCAATTAGGGATAGAAATGTTCATGGGGAAGCTAAAGACATTCGGGTTAGGAACTCTAAGTCCAAGGGTGATGCCAGGAAATACCATTTGTCATCTCATGGAAGGGGTCGGCATCGAGAAGAGGCATCTAGACATAGAGAGGAAGTTCCTCGTGATTTATACCTAAGCGAAAAGGACTATCGAACATATGGTCTCCGATCAGAGAGGAGAAATTTAGATCCTGTGTCTCGACCTTCTTTAGAAACATACAGCAGAGATCATGATAGGGACTATCAACTGAGACATCTAGAGCCCAGATATAGTGACGATGTCTCTACACACGCACAAAGAGAAATAGTTCGCGCGGATCATGTATACTTTAATGGGAAAGATTATCCGGTTTACGGTATTGATTCTAGACATCAAATATCACCTCCTAGAGCAATATCTGCTAGTGGGTTGGAACGCAATACTTATGATTCGATTTACACTCGTCAATATGGCCTTCCTTCTATTGATCCATATCCCCTTCCTTCAAGGAGGGAGGAAGCAGCCCCTCCAACTTATTCAAGAAGTTATCTTGCTGATATTGAACCCATGAGACATGCTGCTGGAGCTCTATCGCATTACACTCAAGCACATCACAAAGAAGTGGAAAATGATACAATGCCGGTTTCATCGCG 5804 42.71 MLRFHVGGKVVERVDLLRKKHWAGRFDLWPFAILYAAWLAVVVPSIDFGDAFIVLGGLAALHVLVLLFTAWSVDFKCFVQYSQVNDIYRADTCKIVPAKFSGSKEIVSLHFRKLLAGSASALDLEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVEKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRDSGQSGEDKSVPADMLILAGSTIVNEAILTGESTPQWKVSITGRGIEEKLSAKRDKSHVLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFRGVVGLSDKEDLETDMTSVSLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWIYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMTVSEARGLDRDTVESDLTFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSMKGTEEYEWLSPDESQTVPYREKEVGTLSETYDLCIGGDCIAMLQRTSTVLDVIPYVKVFARVAPEQKELILTTFKTVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPQSGNSSSEASKDEAVRSAKSKKSKPSSESSGKALVSGEGSSKSKGGAKLDSAAEQASNRPRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLCFLISSVKEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPVGMRDKLLAWALLMFLCCYSWERLLRFMFPGKIPAWRKRQRLVAANLEKKKQWRERESPIFSRLFIVSRLSVLFSVRSLVSSASQIMKQDSNMEANSALLECEKEVGISNVQEAGGNVEEFSIEHEGKRKEAGSSAVQEDSIMKEDFPAEQADDMKEAVAEVRNTVEVGKSDEKFIEEGLRKRKIVKVLKVKKKIIKKSPASGVLKRKKAQVEQEDDKKEKVVRVAQREETQVEQEDDKKEKEVPVAQEVEETLEPQNPTENSKLESKVPIDQEVEETAQPQNPIENSKLESKAKKTNNVLKVKRKIVKKSLANSQKKTNNLQSSPKVQVRKKVENSRSSLQENGEGSEKKVEDTEKPNQKENVKKSISKEEHIEKGEETSNSHKHKFESKNSIKEGKVMEKVGSSDKSTKNQNKKEEDREKKSQREDKHKENLGGLIFMCSAKTKPDCFNYNVMGVSAGKKDVVLAIKPGLKLFLYDFDLRLLYGIYKASSSGGMKLEPKAFNGAFPAQVRFNIYKDCFPLPESIFKKAIQENYYEKHKFKVELTVKQVRKLSDLFRPIGLHPSSALVRSHAEVPIRDRNVHGEAKDIRVRNSKSKGDARKYHLSSHGRGRHREEASRHREEVPRDLYLSEKDYRTYGLRSERRNLDPVSRPSLETYSRDHDRDYQLRHLEPRYSDDVSTHAQREIVRADHVYFNGKDYPVYGIDSRHQISPPRAISASGLERNTYDSIYTRQYGLPSIDPYPLPSRREEAAPPTYSRSYLADIEPMRHAAGALSHYTQAHHKEVENDTMPVSS 1934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29790006 29817132 - CaPI482276_02g016820.1 Cam02g1682 121424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1682 1934 MobiDBLite consensus disorder prediction 1452 1469 - -
Cam02g1682 1934 SFLD p-type atpase 469 955 IPR044492 -
Cam02g1682 1934 Gene3D - 669 846 IPR023214 -
Cam02g1682 1934 MobiDBLite consensus disorder prediction 1731 1763 - -
Cam02g1682 1934 SUPERFAMILY HAD-like 483 834 IPR036412 -
Cam02g1682 1934 NCBIfam HAD-IC family P-type ATPase 403 517 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam02g1682 1934 NCBIfam HAD-IC family P-type ATPase 774 828 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam02g1682 1934 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
Cam02g1682 1934 Pfam Development and cell death domain 1574 1696 IPR013989 -
Cam02g1682 1934 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166(InterPro)
Cam02g1682 1934 MobiDBLite consensus disorder prediction 1470 1568 - -
Cam02g1682 1934 ProSiteProfiles DCD domain profile. 1571 1698 IPR013989 -
Cam02g1682 1934 Gene3D - 483 668 IPR023299 GO:0000166(InterPro)
Cam02g1682 1934 FunFam Cation-transporting ATPase 669 844 - -
Cam02g1682 1934 Coils Coil 896 916 - -
Cam02g1682 1934 Gene3D - 224 388 - -
Cam02g1682 1934 NCBIfam ATP13A2 family polyamine export P-type ATPase 42 1149 IPR006544 GO:0016020(InterPro)|GO:0140358(InterPro)
Cam02g1682 1934 SFLD Haloacid Dehalogenase 469 955 - -
Cam02g1682 1934 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cam02g1682 1934 Pfam Cation transport ATPase (P-type) 540 618 - -
Cam02g1682 1934 SMART dcd 1571 1698 IPR013989 -
Cam02g1682 1934 FunFam Cation-transporting ATPase 484 668 - -
Cam02g1682 1934 MobiDBLite consensus disorder prediction 1347 1388 - -
Cam02g1682 1934 MobiDBLite consensus disorder prediction 830 903 - -
Cam02g1682 1934 CDD P-type_ATPase_cation 170 1107 IPR047820 -
Cam02g1682 1934 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1169 IPR023298 -
Cam02g1682 1934 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cam02g1682 1934 PANTHER CATION-TRANSPORTING ATPASE-RELATED 10 1185 IPR006544 GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0019829(PANTHER)|GO:0030176(PANTHER)|GO:0055085(PANTHER)|GO:0140358(InterPro)
Cam02g1682 1934 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cam02g1682 1934 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cam02g1682 1934 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cam02g1682 1934 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cam02g1682 1934 Pfam E1-E2 ATPase 257 468 - -
Cam02g1682 1934 MobiDBLite consensus disorder prediction 1346 1568 - -
Cam02g1682 1934 MobiDBLite consensus disorder prediction 847 861 - -
Cam02g1682 1934 FunFam Cation-transporting ATPase 226 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1682 Cam-Chr2:29790006 Cam09g0812 Cam-Chr9:8334017 4.50E-178 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1682 K14950 - csv:101215828 2290.0