Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1691 | ATGGGTAAGTTTGATTGGTGTTTTGGGGAGGCCGTCAATATGCTTGTATTGTTCGAGACCTCGGCGGGCTTTGCCCTGTTTAAAGTTTTGGATGAAGGGAAACTCTCCAAAGTTGAGGATTTGTGGAAGGACTTCTCCAATGCAGAATCTGCTAGACAGGTGGTGAAGCTGAAGGCTTTTTCTAAGTTTGAGAACATGTCAGAAGCCTTGGAAGCAACCACGTTGTTGATTGACAGCAAACCTAGCAAAGGTTTGCGGAAGTTTTTACGAGCCAACTGTGATGGGGAAACCTTGGGTGTGGCTGATTCTAAACTTGGAAATATAATTAAAGAGAAGCTGCAAATAGATTGTGTGCACAACAATTCTGTTATGGAGTTGATTAGAGGTTTGAGAAATCAATTGAACGAACTCATTTCTGGCCTAGCTGTTCAAGATTTGGCACCAATGAGCTTGGGATTGTCTCATAGTTTGTCTAGGTATAAACTGAAATTCAGCGCTGACAAGGTGGATACAATGATCATACAAGCTATTGGATTGCTTGATGATCTCGACAAGGAGTTGAATACTTATGCAATGCGGGTTAGGGAGTGGTATGGTTGGCATTTTCCAGAGCTTGCTAAAATTATTCAGGATAACATACAATATGCCAAGACAGTGAAATTAATGGGCAACCGTGACAATGCGGCCAAGCTTGATTTCTCTGAGATACTGCCAGAGGAGGTTGAAAGTGAGCTGAAGGAGGCATCTATGATATCAATGGGAACTGAAGTTAGTGAACTTGACTTGATAAATATTAGAGAGCTTTGTGACCAGGTCCTCTCTCTTTCTGAATACAGAGCCCAACTGTACGATTATCTAAAAAGTAGAATGAACACAATTGCTCCTAATTTGACTGCACTCGTCGGAGAGCTTGTTGGAGCCCGCCTAATTGCCCATGGTGGCAGTTTACTTAACCTTGCTAAGCAGCCTGGAAGCACAGTGCAAATTCTTGGAGCTGAGAAGGCTCTGTTCAGAGCTCTGAAAACAAAGCATGCAACCCCGAAGTATGGTCTTATCTACCATGCATCCTTAATTGGTCAAGCAGCTCCAAAGCTCAAAGGAAAAATTTCTCGGTCTCTTGCTGCTAAAACTGCATTGGCAATTAGGTGTGATGCTTTGGGTGATGGCCAAGATAACTCCATGGGACTTGAAAACCGTGCCAAGCTGGAAGCAAGGTTAAGGAGCCTTGAGGGCAGAGAGTTGGGACGTGTTGCTGGGTCAGCTAAAGGCAAACCTAAAATCGAGGCCTATGACAAGGACCGAAAGAAGAGCATCGGTGGCTTGATAACTGCTGCCAAGACGTATAATCCCGCAGCCGATTCGCTCCTTGGAAAACTTGAGAAGGCTTACGAGGAGGAAGCAGAGGCTCCAGTAACTGGCGAAGAGAAGAAAGAAAAGAAGAAGAAAAAGAAGAGGGTAGAAGAAGAGGAAACAGTCATGGAGGATGATTCAAAACCAGAAGTTGAAAATGTTGGGAAAGACGAGAAGAAGAAGAAAAAGAAGAAACGAGCAGAAGAGGCTGAAGAAGTACAAGATGGTAGTGAGGAAAAGGAAAAGAAGAAAAAGAAGAGAAAGCATGCAGAAGAGGAAGAAGAGGAAGCCGAACAGCCAAGCAAGAAGAAAGAAAAGAAGAAGAAGAAGAAAAATTCTGATTTTCATGGAGAAAACTTCCTTCTAGTTGAAGAGCTTCTTGCATTACTCACTCTCTTCCACAAGGGAATGTGCCGAGAGGTAGCTTCCAGAAACTTAGCAGATTCCAAGAATAAGAAGGAGAAGATTTCTGAATGTGGTGATGATTTGGAAAGAAAAGAAGCTGGTGTGGCTGTTGTTGATGTTGCTCAGGAGGAAGAGCATGGCCATGGGGCTCAGCCCTTGACAAAAGAGCAGAGAAGAAAGTTGAAACCTAACCCCAGGCTGAGTAATTTGCCAAAGCAATCTCAGGGCGAGCAGGTGGCTGCTGGATGGCCTTCTTGGCTCACAGCAGTTTGTGGGGAGGCACTCAGTGGTTGGATTCCGAGGAAGGCTGATACATTTGAGAAGATTGATAAGATTGGACAAGGAACATACAGTAATGTGTACAAAGCAAAAGATATACTGACTGGTAAGGTCGTTGCACTGAAGAAGGTACGTTTTGACAATTTAGAGCCAGAAAGTGTAAGATTTATGGCCAGAGAGATTCTCATTTTGCGACGCCTAGATCATCCTAATGTTGTAAAGCTAGAGGGTTTGGTTACATCAAGGATGTCATGTAGTTTGTACCTCGTATTTGAGTACATGGAGCATGATTTAGCTGGTCTTGCTGCAAATCCATCTATCAAATTTACAGAGGCTCAGGTTAAGTGTTTCATGCAACAACTTCTATCAGGACTCGAGCATTGTCACAGCCACAGGGTGCTTCATCGCGATATTAAGGGTTCAAATCTTCTTATTGACGGTGAAGGGTTGCTTAAGATTGCTGACTTTGGACTAGCTACTTTCTTTGATCCAAAACACAAGCACCCATTGACTAATCGTGTTGTAACCTTATGGTATCGATCCCCCGAGCTTCTACTTGGTGCAACTCACTATGGTGTAGGCATCGACCTTTGGAGTGCAGGTTGTATTTTAGCAGAGTTATTAGCTGGGAGGGCCATAATGCCCGGCCGTACAGAGGTTGAGCAACTACATAAGATATTCAAGCTGTGTGGCTCAGCTTCAGATGAATATTTAAAGAGGGCAAAGTTGCCAAATGCAGCCTTATTTAGACCCCGAGAACCTTATAAGAGATGTATAAAAGAGACTTTTAAGGATTTCCCACCATCATCATTTCCCCTTATAGAAACACTTCTTGCAATTGACCCAGCTGAGAGAATGACAGCTACAGATGCATTGAAGAGCGAGTTTTTCACTTCAGAACCTTATGCTTGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCTAAACGACGGGATGATGAAGCTCGGAGACAAAGAGCAGCAAGTAAATTGCAGAATGATCGTGTGAAGAAGACACACACACGTAACCGTGCTGGTAGGGCCATACCTGTTCAAGGAGCCAATGCAGAACTCCAATCAAATATTGATAGACGGCGTCTAATTACTCATGCAAATGCAAAGAGCAAGAGCGAAAAGTTCCCCCCTCCACATCAAGATGGGGCACTCGGGTTCACATTGGGATATTCACGTCATATTGATCCAGCTGTTATTCCTTCTGATGTTCCATTTAGCTCCACATCATTTGGCTATCCAAACGAACTGGACCAAGCCTGGTCGGGTCCACTGGTTCAGTCTTCTAACATCGGTGCTCAAAGGCAGAAGCATTTGGGAGGTGATGCAAAAGAACAGCAATCTTCAGTTAAAGGAAAGAAGGCAGCATGA | 3432 | 43.91 | MGKFDWCFGEAVNMLVLFETSAGFALFKVLDEGKLSKVEDLWKDFSNAESARQVVKLKAFSKFENMSEALEATTLLIDSKPSKGLRKFLRANCDGETLGVADSKLGNIIKEKLQIDCVHNNSVMELIRGLRNQLNELISGLAVQDLAPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNIQYAKTVKLMGNRDNAAKLDFSEILPEEVESELKEASMISMGTEVSELDLINIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRCDALGDGQDNSMGLENRAKLEARLRSLEGRELGRVAGSAKGKPKIEAYDKDRKKSIGGLITAAKTYNPAADSLLGKLEKAYEEEAEAPVTGEEKKEKKKKKKRVEEEETVMEDDSKPEVENVGKDEKKKKKKKRAEEAEEVQDGSEEKEKKKKKRKHAEEEEEEAEQPSKKKEKKKKKKNSDFHGENFLLVEELLALLTLFHKGMCREVASRNLADSKNKKEKISECGDDLERKEAGVAVVDVAQEEEHGHGAQPLTKEQRRKLKPNPRLSNLPKQSQGEQVAAGWPSWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTEAQVKCFMQQLLSGLEHCHSHRVLHRDIKGSNLLIDGEGLLKIADFGLATFFDPKHKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLAGRAIMPGRTEVEQLHKIFKLCGSASDEYLKRAKLPNAALFRPREPYKRCIKETFKDFPPSSFPLIETLLAIDPAERMTATDALKSEFFTSEPYACEPSSLPKYPPSKEMDAKRRDDEARRQRAASKLQNDRVKKTHTRNRAGRAIPVQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAVIPSDVPFSSTSFGYPNELDQAWSGPLVQSSNIGAQRQKHLGGDAKEQQSSVKGKKAA | 1143 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 29917626 | 29928861 | - | CaPI482276_02g016910.1 | Cam02g1691 | 121433 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1691 | 1143 | ProSiteProfiles | Nop domain profile. | 293 | 411 | IPR002687 | - | |
Cam02g1691 | 1143 | Coils | Coil | 476 | 496 | - | - | |
Cam02g1691 | 1143 | Pfam | Protein kinase domain | 691 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1691 | 1143 | FunFam | probable serine/threonine-protein kinase At1g54610 | 774 | 1015 | - | - | |
Cam02g1691 | 1143 | ProSiteProfiles | Protein kinase domain profile. | 691 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1691 | 1143 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 811 | 823 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 1125 | 1143 | - | - | |
Cam02g1691 | 1143 | Pfam | NOP5NT (NUC127) domain | 15 | 78 | IPR012974 | - | |
Cam02g1691 | 1143 | CDD | STKc_CDK9_like | 691 | 975 | - | - | |
Cam02g1691 | 1143 | Gene3D | - | 142 | 297 | - | - | |
Cam02g1691 | 1143 | SUPERFAMILY | Nop domain | 166 | 410 | IPR036070 | - | |
Cam02g1691 | 1143 | Pfam | snoRNA binding domain, fibrillarin | 179 | 407 | IPR002687 | - | |
Cam02g1691 | 1143 | FunFam | Nucleolar protein 58 | 297 | 418 | - | - | |
Cam02g1691 | 1143 | FunFam | probable serine/threonine-protein kinase At1g54610 | 678 | 773 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 993 | 1022 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 1111 | 1143 | - | - | |
Cam02g1691 | 1143 | SUPERFAMILY | Protein kinase-like (PK-like) | 686 | 980 | IPR011009 | - | |
Cam02g1691 | 1143 | Coils | Coil | 510 | 546 | - | - | |
Cam02g1691 | 1143 | FunFam | Probable Nucleolar protein 58 | 142 | 296 | - | - | |
Cam02g1691 | 1143 | Gene3D | Phosphorylase Kinase; domain 1 | 678 | 773 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 627 | 662 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 627 | 648 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 982 | 1026 | - | - | |
Cam02g1691 | 1143 | Gene3D | Nop domain | 298 | 410 | IPR042239 | - | |
Cam02g1691 | 1143 | PANTHER | NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 | 14 | 559 | IPR045056 | GO:0030515(PANTHER)|GO:0030515(InterPro)|GO:0031428(PANTHER)|GO:0031428(InterPro)|GO:0032040(InterPro)|GO:0032040(PANTHER) | |
Cam02g1691 | 1143 | ProSitePatterns | Protein kinases ATP-binding region signature. | 697 | 720 | IPR017441 | GO:0005524(InterPro) | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 465 | 553 | - | - | |
Cam02g1691 | 1143 | MobiDBLite | consensus disorder prediction | 465 | 563 | - | - | |
Cam02g1691 | 1143 | SMART | NOSIC_2 | 172 | 224 | IPR012976 | - | |
Cam02g1691 | 1143 | SMART | serkin_6 | 691 | 975 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1691 | 1143 | Gene3D | Transferase(Phosphotransferase) domain 1 | 774 | 1015 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1691 | Cam-Chr2:29917626 | Cam02g1825 | Cam-Chr2:31306917 | 2.30E-150 | dispersed | |
Cam01g1625 | Cam-Chr1:29818182 | Cam02g1691 | Cam-Chr2:29917626 | 8.50E-117 | transposed | |
Cam03g0395 | Cam-Chr3:5064311 | Cam02g1691 | Cam-Chr2:29917626 | 1.90E-185 | transposed | |
Cam03g1660 | Cam-Chr3:31704886 | Cam02g1691 | Cam-Chr2:29917626 | 8.00E-240 | transposed | |
Cam04g0610 | Cam-Chr4:20016442 | Cam02g1691 | Cam-Chr2:29917626 | 1.50E-48 | transposed | |
Cam05g0674 | Cam-Chr5:5892244 | Cam02g1691 | Cam-Chr2:29917626 | 7.10E-225 | transposed | |
Cam05g1097 | Cam-Chr5:10044173 | Cam02g1691 | Cam-Chr2:29917626 | 1.90E-171 | transposed | |
Cam05g2367 | Cam-Chr5:31771415 | Cam02g1691 | Cam-Chr2:29917626 | 3.10E-59 | transposed | |
Cam05g2720 | Cam-Chr5:34549106 | Cam02g1691 | Cam-Chr2:29917626 | 1.60E-23 | transposed | |
Cam08g0065 | Cam-Chr8:1256711 | Cam02g1691 | Cam-Chr2:29917626 | 3.80E-153 | transposed | |
Cam08g0756 | Cam-Chr8:7643073 | Cam02g1691 | Cam-Chr2:29917626 | 6.80E-117 | transposed | |
Cam11g0058 | Cam-Chr11:2172420 | Cam02g1691 | Cam-Chr2:29917626 | 7.60E-163 | transposed | |
Cam11g1918 | Cam-Chr11:31614992 | Cam02g1691 | Cam-Chr2:29917626 | 1.60E-48 | transposed | |
Cam02g1691 | Cam-Chr2:29917626 | Cam06g0599 | Cam-Chr6:8128047 | 8.00E-26 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84973 | PF00069 | Pkinase | 1.00E-66 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1691 | K08819 | - | csv:101217497 | 1075.08 |