Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1691 ATGGGTAAGTTTGATTGGTGTTTTGGGGAGGCCGTCAATATGCTTGTATTGTTCGAGACCTCGGCGGGCTTTGCCCTGTTTAAAGTTTTGGATGAAGGGAAACTCTCCAAAGTTGAGGATTTGTGGAAGGACTTCTCCAATGCAGAATCTGCTAGACAGGTGGTGAAGCTGAAGGCTTTTTCTAAGTTTGAGAACATGTCAGAAGCCTTGGAAGCAACCACGTTGTTGATTGACAGCAAACCTAGCAAAGGTTTGCGGAAGTTTTTACGAGCCAACTGTGATGGGGAAACCTTGGGTGTGGCTGATTCTAAACTTGGAAATATAATTAAAGAGAAGCTGCAAATAGATTGTGTGCACAACAATTCTGTTATGGAGTTGATTAGAGGTTTGAGAAATCAATTGAACGAACTCATTTCTGGCCTAGCTGTTCAAGATTTGGCACCAATGAGCTTGGGATTGTCTCATAGTTTGTCTAGGTATAAACTGAAATTCAGCGCTGACAAGGTGGATACAATGATCATACAAGCTATTGGATTGCTTGATGATCTCGACAAGGAGTTGAATACTTATGCAATGCGGGTTAGGGAGTGGTATGGTTGGCATTTTCCAGAGCTTGCTAAAATTATTCAGGATAACATACAATATGCCAAGACAGTGAAATTAATGGGCAACCGTGACAATGCGGCCAAGCTTGATTTCTCTGAGATACTGCCAGAGGAGGTTGAAAGTGAGCTGAAGGAGGCATCTATGATATCAATGGGAACTGAAGTTAGTGAACTTGACTTGATAAATATTAGAGAGCTTTGTGACCAGGTCCTCTCTCTTTCTGAATACAGAGCCCAACTGTACGATTATCTAAAAAGTAGAATGAACACAATTGCTCCTAATTTGACTGCACTCGTCGGAGAGCTTGTTGGAGCCCGCCTAATTGCCCATGGTGGCAGTTTACTTAACCTTGCTAAGCAGCCTGGAAGCACAGTGCAAATTCTTGGAGCTGAGAAGGCTCTGTTCAGAGCTCTGAAAACAAAGCATGCAACCCCGAAGTATGGTCTTATCTACCATGCATCCTTAATTGGTCAAGCAGCTCCAAAGCTCAAAGGAAAAATTTCTCGGTCTCTTGCTGCTAAAACTGCATTGGCAATTAGGTGTGATGCTTTGGGTGATGGCCAAGATAACTCCATGGGACTTGAAAACCGTGCCAAGCTGGAAGCAAGGTTAAGGAGCCTTGAGGGCAGAGAGTTGGGACGTGTTGCTGGGTCAGCTAAAGGCAAACCTAAAATCGAGGCCTATGACAAGGACCGAAAGAAGAGCATCGGTGGCTTGATAACTGCTGCCAAGACGTATAATCCCGCAGCCGATTCGCTCCTTGGAAAACTTGAGAAGGCTTACGAGGAGGAAGCAGAGGCTCCAGTAACTGGCGAAGAGAAGAAAGAAAAGAAGAAGAAAAAGAAGAGGGTAGAAGAAGAGGAAACAGTCATGGAGGATGATTCAAAACCAGAAGTTGAAAATGTTGGGAAAGACGAGAAGAAGAAGAAAAAGAAGAAACGAGCAGAAGAGGCTGAAGAAGTACAAGATGGTAGTGAGGAAAAGGAAAAGAAGAAAAAGAAGAGAAAGCATGCAGAAGAGGAAGAAGAGGAAGCCGAACAGCCAAGCAAGAAGAAAGAAAAGAAGAAGAAGAAGAAAAATTCTGATTTTCATGGAGAAAACTTCCTTCTAGTTGAAGAGCTTCTTGCATTACTCACTCTCTTCCACAAGGGAATGTGCCGAGAGGTAGCTTCCAGAAACTTAGCAGATTCCAAGAATAAGAAGGAGAAGATTTCTGAATGTGGTGATGATTTGGAAAGAAAAGAAGCTGGTGTGGCTGTTGTTGATGTTGCTCAGGAGGAAGAGCATGGCCATGGGGCTCAGCCCTTGACAAAAGAGCAGAGAAGAAAGTTGAAACCTAACCCCAGGCTGAGTAATTTGCCAAAGCAATCTCAGGGCGAGCAGGTGGCTGCTGGATGGCCTTCTTGGCTCACAGCAGTTTGTGGGGAGGCACTCAGTGGTTGGATTCCGAGGAAGGCTGATACATTTGAGAAGATTGATAAGATTGGACAAGGAACATACAGTAATGTGTACAAAGCAAAAGATATACTGACTGGTAAGGTCGTTGCACTGAAGAAGGTACGTTTTGACAATTTAGAGCCAGAAAGTGTAAGATTTATGGCCAGAGAGATTCTCATTTTGCGACGCCTAGATCATCCTAATGTTGTAAAGCTAGAGGGTTTGGTTACATCAAGGATGTCATGTAGTTTGTACCTCGTATTTGAGTACATGGAGCATGATTTAGCTGGTCTTGCTGCAAATCCATCTATCAAATTTACAGAGGCTCAGGTTAAGTGTTTCATGCAACAACTTCTATCAGGACTCGAGCATTGTCACAGCCACAGGGTGCTTCATCGCGATATTAAGGGTTCAAATCTTCTTATTGACGGTGAAGGGTTGCTTAAGATTGCTGACTTTGGACTAGCTACTTTCTTTGATCCAAAACACAAGCACCCATTGACTAATCGTGTTGTAACCTTATGGTATCGATCCCCCGAGCTTCTACTTGGTGCAACTCACTATGGTGTAGGCATCGACCTTTGGAGTGCAGGTTGTATTTTAGCAGAGTTATTAGCTGGGAGGGCCATAATGCCCGGCCGTACAGAGGTTGAGCAACTACATAAGATATTCAAGCTGTGTGGCTCAGCTTCAGATGAATATTTAAAGAGGGCAAAGTTGCCAAATGCAGCCTTATTTAGACCCCGAGAACCTTATAAGAGATGTATAAAAGAGACTTTTAAGGATTTCCCACCATCATCATTTCCCCTTATAGAAACACTTCTTGCAATTGACCCAGCTGAGAGAATGACAGCTACAGATGCATTGAAGAGCGAGTTTTTCACTTCAGAACCTTATGCTTGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCTAAACGACGGGATGATGAAGCTCGGAGACAAAGAGCAGCAAGTAAATTGCAGAATGATCGTGTGAAGAAGACACACACACGTAACCGTGCTGGTAGGGCCATACCTGTTCAAGGAGCCAATGCAGAACTCCAATCAAATATTGATAGACGGCGTCTAATTACTCATGCAAATGCAAAGAGCAAGAGCGAAAAGTTCCCCCCTCCACATCAAGATGGGGCACTCGGGTTCACATTGGGATATTCACGTCATATTGATCCAGCTGTTATTCCTTCTGATGTTCCATTTAGCTCCACATCATTTGGCTATCCAAACGAACTGGACCAAGCCTGGTCGGGTCCACTGGTTCAGTCTTCTAACATCGGTGCTCAAAGGCAGAAGCATTTGGGAGGTGATGCAAAAGAACAGCAATCTTCAGTTAAAGGAAAGAAGGCAGCATGA 3432 43.91 MGKFDWCFGEAVNMLVLFETSAGFALFKVLDEGKLSKVEDLWKDFSNAESARQVVKLKAFSKFENMSEALEATTLLIDSKPSKGLRKFLRANCDGETLGVADSKLGNIIKEKLQIDCVHNNSVMELIRGLRNQLNELISGLAVQDLAPMSLGLSHSLSRYKLKFSADKVDTMIIQAIGLLDDLDKELNTYAMRVREWYGWHFPELAKIIQDNIQYAKTVKLMGNRDNAAKLDFSEILPEEVESELKEASMISMGTEVSELDLINIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLIAHGGSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKLKGKISRSLAAKTALAIRCDALGDGQDNSMGLENRAKLEARLRSLEGRELGRVAGSAKGKPKIEAYDKDRKKSIGGLITAAKTYNPAADSLLGKLEKAYEEEAEAPVTGEEKKEKKKKKKRVEEEETVMEDDSKPEVENVGKDEKKKKKKKRAEEAEEVQDGSEEKEKKKKKRKHAEEEEEEAEQPSKKKEKKKKKKNSDFHGENFLLVEELLALLTLFHKGMCREVASRNLADSKNKKEKISECGDDLERKEAGVAVVDVAQEEEHGHGAQPLTKEQRRKLKPNPRLSNLPKQSQGEQVAAGWPSWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDILTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTEAQVKCFMQQLLSGLEHCHSHRVLHRDIKGSNLLIDGEGLLKIADFGLATFFDPKHKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLAGRAIMPGRTEVEQLHKIFKLCGSASDEYLKRAKLPNAALFRPREPYKRCIKETFKDFPPSSFPLIETLLAIDPAERMTATDALKSEFFTSEPYACEPSSLPKYPPSKEMDAKRRDDEARRQRAASKLQNDRVKKTHTRNRAGRAIPVQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAVIPSDVPFSSTSFGYPNELDQAWSGPLVQSSNIGAQRQKHLGGDAKEQQSSVKGKKAA 1143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29917626 29928861 - CaPI482276_02g016910.1 Cam02g1691 121433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1691 1143 ProSiteProfiles Nop domain profile. 293 411 IPR002687 -
Cam02g1691 1143 Coils Coil 476 496 - -
Cam02g1691 1143 Pfam Protein kinase domain 691 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1691 1143 FunFam probable serine/threonine-protein kinase At1g54610 774 1015 - -
Cam02g1691 1143 ProSiteProfiles Protein kinase domain profile. 691 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1691 1143 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1691 1143 MobiDBLite consensus disorder prediction 1125 1143 - -
Cam02g1691 1143 Pfam NOP5NT (NUC127) domain 15 78 IPR012974 -
Cam02g1691 1143 CDD STKc_CDK9_like 691 975 - -
Cam02g1691 1143 Gene3D - 142 297 - -
Cam02g1691 1143 SUPERFAMILY Nop domain 166 410 IPR036070 -
Cam02g1691 1143 Pfam snoRNA binding domain, fibrillarin 179 407 IPR002687 -
Cam02g1691 1143 FunFam Nucleolar protein 58 297 418 - -
Cam02g1691 1143 FunFam probable serine/threonine-protein kinase At1g54610 678 773 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 993 1022 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 1111 1143 - -
Cam02g1691 1143 SUPERFAMILY Protein kinase-like (PK-like) 686 980 IPR011009 -
Cam02g1691 1143 Coils Coil 510 546 - -
Cam02g1691 1143 FunFam Probable Nucleolar protein 58 142 296 - -
Cam02g1691 1143 Gene3D Phosphorylase Kinase; domain 1 678 773 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 627 662 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 627 648 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 982 1026 - -
Cam02g1691 1143 Gene3D Nop domain 298 410 IPR042239 -
Cam02g1691 1143 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 14 559 IPR045056 GO:0030515(PANTHER)|GO:0030515(InterPro)|GO:0031428(PANTHER)|GO:0031428(InterPro)|GO:0032040(InterPro)|GO:0032040(PANTHER)
Cam02g1691 1143 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524(InterPro)
Cam02g1691 1143 MobiDBLite consensus disorder prediction 465 553 - -
Cam02g1691 1143 MobiDBLite consensus disorder prediction 465 563 - -
Cam02g1691 1143 SMART NOSIC_2 172 224 IPR012976 -
Cam02g1691 1143 SMART serkin_6 691 975 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1691 1143 Gene3D Transferase(Phosphotransferase) domain 1 774 1015 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1691 Cam-Chr2:29917626 Cam02g1825 Cam-Chr2:31306917 2.30E-150 dispersed
Cam01g1625 Cam-Chr1:29818182 Cam02g1691 Cam-Chr2:29917626 8.50E-117 transposed
Cam03g0395 Cam-Chr3:5064311 Cam02g1691 Cam-Chr2:29917626 1.90E-185 transposed
Cam03g1660 Cam-Chr3:31704886 Cam02g1691 Cam-Chr2:29917626 8.00E-240 transposed
Cam04g0610 Cam-Chr4:20016442 Cam02g1691 Cam-Chr2:29917626 1.50E-48 transposed
Cam05g0674 Cam-Chr5:5892244 Cam02g1691 Cam-Chr2:29917626 7.10E-225 transposed
Cam05g1097 Cam-Chr5:10044173 Cam02g1691 Cam-Chr2:29917626 1.90E-171 transposed
Cam05g2367 Cam-Chr5:31771415 Cam02g1691 Cam-Chr2:29917626 3.10E-59 transposed
Cam05g2720 Cam-Chr5:34549106 Cam02g1691 Cam-Chr2:29917626 1.60E-23 transposed
Cam08g0065 Cam-Chr8:1256711 Cam02g1691 Cam-Chr2:29917626 3.80E-153 transposed
Cam08g0756 Cam-Chr8:7643073 Cam02g1691 Cam-Chr2:29917626 6.80E-117 transposed
Cam11g0058 Cam-Chr11:2172420 Cam02g1691 Cam-Chr2:29917626 7.60E-163 transposed
Cam11g1918 Cam-Chr11:31614992 Cam02g1691 Cam-Chr2:29917626 1.60E-48 transposed
Cam02g1691 Cam-Chr2:29917626 Cam06g0599 Cam-Chr6:8128047 8.00E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84973 PF00069 Pkinase 1.00E-66 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1691 K08819 - csv:101217497 1075.08