Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1702 ATGGATGGACTCTCAGATCTTGAGCTTGATTGCTCTGAATTTGTTGAAGTTGATCCCACTGGCAGATATGGCAGATACAATGAAATTTTGGGAAAAGGAGCTTCAAAAACAGTTTACAGAGCATTTGATGAATATGAAGGAATTGAGGTCGCTTGGAATCAAGTGAAACTTTATGATTTCTTGCAAAGTCCTGAAGATCTGGAAAGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAGCATAGAAATATAATGAAATTCTATACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGCACTCTCAGGCAGTATAGGCTGAAGCATAAGAGAGTTAATATTAGAGCGGTGAAGCATTGGTGCAGGCAGATTTTGACGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTCAAGTGTGACAATATCTTTGTTAATGGGAATCAAGGGGAAGTTAAGATTGGTGATCTTGGACTTGCAGCAATCCTCAGGAAATCTCATGCTGATCATTGTGTGGGGACACCAGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCATACAACGAATTAGTCGATATTTACTCATTTGGAATGTGCATTCTGGAGATGATAACTTTCGAATATCCATACAGCGAATGCACACATCCTGCTCAAATCTATAAGAAAGTCATATCTGGGAAAAAACCAGATGCCTTGTACAAAGTGAAGGATCCCGAAGTGCGGCAATTCATTGATAAGTGTTTGGCATCGGTTTCATTTAGGCTCTCGGCAGCGGAGCTTTTGAATGACCCTTTTCTTCAAATTGATAATGGTGAATACGATCTAAGACCTGTTGATTATGGAAGAGGATTGGACGACGTTTGCCCTCTTATAAGACAACCTTATCTAGAACTTCGTAGAAGTGACAGCTCCTTCTGTAATGGATATCCATATGATTATAGTTTTGAAGCTTCAAGTGAGTCAGGTTATCATCCAATTGATAATGAAACCAATGGGATTGAACTTTTTGAGTATTGTGAAGGTGAACATTCTGAGGATGTTGATATTAGCATTAAAGGGAAGATGAGAGAAGATGGTGGCATCTTCTTAAGACTTAGAATTGCAGATAAAGAAGGGCGTATCAGGAACATTTATTTCCCATTTGATGTCGAGACAGATACAGCATTAAGTGTAGCAACAGAAATGGTTGCAGAGCTTGATATTACAGATCAAGACGTGACCAGAATTGCTGATATGATTGACGGAGAAATTGCTTCCTTGGTGCCTGAATGGAGGCCAGGTCCGGGAATTGAGGAAACGCCCCGCTTTGCAAATCAAAGCTATTGTCATAATTGTTCTACTACTACTTACAGCAATGCATCAAATGGTCTCTTGTTAAGAAATCCCGAGGGAAAGAACTCAGAGGTAGCTCAATGCTGTGGACATCGGTATGCTTCGATGCATGGGCGTTTTGAGGAGATAATGTACCAAGCTGACGAGTCTGAGCATCATACAGCAGAGGGTGCACCGAATGTGTCGAGCCATTCCAATTGCCTGAATTATCCTGAAATATGGGGACATCATGAAAGCCGTGAACTTAGTTCAATGAGCTCACGACAAAGCCATTCGGATGAAGATTACGAGAAAACAGATCAACCAGTTACAGTCATGGACACAAAAGAAATGATAATGGAAAGTAAAACTGCTCCTCATACGAGACGTACGCTTAGGAGCCTGATGAATTCCCTTTCTTTCTCAGAAACCGCTTCTCCTCCAGATATTAATGAGAATGATGTCCAACAAGAAATGAGATGGATTAAAGCCAAGTACCAAATAGAATTAAGCAAGCTCAGAGATCAACAGTTAAATCTTTCTTCAAAATCTTCAAGTTTTGAAGACGGGCAACAAAAAATGGAAAATGGGACTCTTCAAGGCAACCACAACCAAATCCTTGACAGGTCTGTTCAAGACACGAACCAAAGTAGTACTGGTAGCCATGTTTATATCGATAATAGCTGTTACAGTATAGACGCGCACAACCAAAGGGCTCGAAATCGCAAGGCTGTGGAGTCCCCTATTGTGGAGAAAGTTGCCACTGCCAAAAATGCCTGCACTGGTTCATTGCTTCCAAGCTCCCTTCATAGAACAATCTCTCTCCCAGTTGATGCTGTTCATATATAA 2205 40.68 MDGLSDLELDCSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILTGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFIDKCLASVSFRLSAAELLNDPFLQIDNGEYDLRPVDYGRGLDDVCPLIRQPYLELRRSDSSFCNGYPYDYSFEASSESGYHPIDNETNGIELFEYCEGEHSEDVDISIKGKMREDGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETPRFANQSYCHNCSTTTYSNASNGLLLRNPEGKNSEVAQCCGHRYASMHGRFEEIMYQADESEHHTAEGAPNVSSHSNCLNYPEIWGHHESRELSSMSSRQSHSDEDYEKTDQPVTVMDTKEMIMESKTAPHTRRTLRSLMNSLSFSETASPPDINENDVQQEMRWIKAKYQIELSKLRDQQLNLSSKSSSFEDGQQKMENGTLQGNHNQILDRSVQDTNQSSTGSHVYIDNSCYSIDAHNQRARNRKAVESPIVEKVATAKNACTGSLLPSSLHRTISLPVDAVHI 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30052736 30056107 - CaPI482276_02g017020.1 Cam02g1702 121444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1702 734 FunFam probable serine/threonine-protein kinase WNK9 374 458 - -
Cam02g1702 734 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Cam02g1702 734 Gene3D - 374 441 - -
Cam02g1702 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1702 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1702 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 432 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Cam02g1702 734 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Cam02g1702 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 630 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cam02g1702 734 CDD STKc_WNK 22 281 - -
Cam02g1702 734 SMART serkin_6 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1702 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Cam02g1702 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Cam02g1702 734 MobiDBLite consensus disorder prediction 538 560 - -
Cam02g1702 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1702 734 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1702 Cam-Chr2:30052736 Cam03g0308 Cam-Chr3:4315165 6.90E-140 dispersed
Cam01g0161 Cam-Chr1:1968351 Cam02g1702 Cam-Chr2:30052736 5.80E-127 transposed
Cam02g0884 Cam-Chr2:12088796 Cam02g1702 Cam-Chr2:30052736 5.40E-93 transposed
Cam06g0998 Cam-Chr6:15480120 Cam02g1702 Cam-Chr2:30052736 4.30E-204 transposed
Cam10g0432 Cam-Chr10:6692502 Cam02g1702 Cam-Chr2:30052736 9.80E-101 transposed
Cam02g1702 Cam-Chr2:30052736 Cam06g0620 Cam-Chr6:8446147 1.20E-227 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84974 PF00069 Pkinase 3.50E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1702 K08867 - csv:101219552 1357.81