Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1751 ATGATGGCGAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCGGGAGTTGATCATACATCGACCAGCTCCTCCACCATGAGAAAACCAGATCTGGGAATCTCCATGAACGACAACGGTGGACCCGTTAACAGCGGTGGTGTCGATGACGATGACGATAGAGATAACGGTGGTGATGAACCTAAAGAAGGAGCTGTCGAAGTTCCAACGCGCCGTCCTCGTGGCCGTCCACCGGGCTCCAAGAATAAGCCTAAGCCTCCTATCTTCGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGATATTGCGGAAAGCGTTGCTCAATTTGCTCGACGGCGACAGAGAGGTGTTTCTGTGCTTAGTGGCAGCGGTACGGTAACGAATGTCACACTCCGGCAACCATCTGCGCCCGGTGCAGTCTTAACCCTTCACGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCCGGACCAGCCCCACCCGGGTCAACTGGACTAACAATCTACTTGGCCGGGGGACAAGGGCAAGTGGTGGGTGGCAGCGTAGTCGGGCCACTCACCGCTGCCGGCCCAGTGATGGTGATCGCTGCAACGTTTTCCAACGCGACATACGAAAGATTACCTTTGGAAGAGGAAGAAGAAGGCGGCGGAGTAGGAGCACAAGGGCACACATCAGCAGGCGGTGGTGCAGGCGACGGTTCGCCACAAGGCATCGGAGGCGGAGGCGGAGTCGGAGATCCGTCAGCTATGCCTCCGCTGTACAATTTACCGCCGAACTTGCTACCGAATGGCGGCGGCGGGCAGATGAATCAGGAGGCTTATTCGTGGGCTCACGGCGGCCGGCCGTCGTTTTAA 888 56.53 MMANRWWTSGQMGLPGVDHTSTSSSTMRKPDLGISMNDNGGPVNSGGVDDDDDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAQFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEEGGGVGAQGHTSAGGGAGDGSPQGIGGGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPSF 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30595749 30596818 + CaPI482276_02g017510.1 Cam02g1751 121493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1751 295 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 293 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam02g1751 295 MobiDBLite consensus disorder prediction 1 95 - -
Cam02g1751 295 FunFam AT-hook motif nuclear-localized protein 98 225 - -
Cam02g1751 295 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 211 IPR005175 -
Cam02g1751 295 MobiDBLite consensus disorder prediction 14 42 - -
Cam02g1751 295 Gene3D - 99 225 - -
Cam02g1751 295 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Cam02g1751 295 CDD DUF296 99 182 IPR005175 -
Cam02g1751 295 ProSiteProfiles PPC domain profile profile. 95 233 IPR005175 -
Cam02g1751 295 PIRSF ESCAROLA 12 295 IPR014476 GO:0003680(InterPro)
Cam02g1751 295 MobiDBLite consensus disorder prediction 221 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0333 Cam-Chr2:4065479 Cam02g1751 Cam-Chr2:30595749 1.10E-58 dispersed
Cam02g1751 Cam-Chr2:30595749 Cam07g0345 Cam-Chr7:4631431 8.00E-71 dispersed
Cam02g1751 Cam-Chr2:30595749 Cam02g1753 Cam-Chr2:30632156 3.80E-20 proximal
Cam02g1751 Cam-Chr2:30595749 Cam06g0691 Cam-Chr6:9259495 3.20E-59 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1751 - - - 0.0