Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1753 ATGGAACCCAATGAAAACCAGCTCAGCTCCTACTTCCACCACCATCAACACCACCATCAGAGTCCCACCACATCGCCGACCAATGGCCTTTTACCACCCACCCACCACCTCTCCTCCGCCGCCGCCGCCTCCGACGCCGGCCCTCATGTCGTATACCCTCACTCTGTCCCTTCCGCCGCCGTGTCCTCGTCTCCTCTCGAGCCCGCACGCCGGAAGAGAGGCCGGCCGAGGAAGTACGGCACGCCGGAAGAAGCTTTAGCGGCTAAAAAAGCTGCTACGGCGTCGTCTCACTCTTCGTCCTCTAAGGCTAAGAAGGAACTCGCTTCTTCTTCTTCCCTTAATGCCGTTTCCGCTTCTTCTTCCTTCTCCGCGCCTTCCAAAAAATCTCAGTTGGCTGCACTTGGTAATGCAGGCCAAGGTTTTGCGCCACATGTTATTAATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGATGTTTATGCAACAATGTAAGCGGGAAATTTGTATCCTTTCTGCATCTGGTTCAATCTCCAATGCATCTCTCCGTCAGCCAGCCGCATCCGGAGGCAATATTGCATATGAGGGTCGTTTTGAGATTGTTTCGTTATGCGGATCTTATGTACGAACTGACCTCGGAGGAAAGACGGGTGGTCTTAGTGTATGTCTATCAAGTGCTGAAGGCCACATCATAGGAGGGGGAGTTGGTGGACCGTTGAAGGCTGCTGGACCCGTGCAGGTTATTGTTGGAACCTTCGTAATCGACCCCAAGAAGGAAGTTGGTGGTGGTAAAGGCGATGCATCTGCTGGCAAGTTGTCCTCACCTATTGGTGGGACATCGATGTCAAATCTACGCTATGGCTCCAACATTGACTCGGGAGGTAATCATGTAAGGGGAAATGATGAACACCAAGGTCTTGGAGAGAGTCATTTTTTGCTTCAGCCCCGGGGAGTGAATCTGACATCACCGCGATCAACGGATTGGAGAACGGGTCTGGATGCCACAAACACTGCTTATGATTTGACAGGAAGAACAGGCCATCATTCTCCCGAAAACGGAGATTATGATCAGATTCCCGATTGA 1086 51.93 MEPNENQLSSYFHHHQHHHQSPTTSPTNGLLPPTHHLSSAAAASDAGPHVVYPHSVPSAAVSSSPLEPARRKRGRPRKYGTPEEALAAKKAATASSHSSSSKAKKELASSSSLNAVSASSSFSAPSKKSQLAALGNAGQGFAPHVINVAAGEDVGQKIMMFMQQCKREICILSASGSISNASLRQPAASGGNIAYEGRFEIVSLCGSYVRTDLGGKTGGLSVCLSSAEGHIIGGGVGGPLKAAGPVQVIVGTFVIDPKKEVGGGKGDASAGKLSSPIGGTSMSNLRYGSNIDSGGNHVRGNDEHQGLGESHFLLQPRGVNLTSPRSTDWRTGLDATNTAYDLTGRTGHHSPENGDYDQIPD 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30632156 30638146 - CaPI482276_02g017530.1 Cam02g1753 121495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1753 361 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 253 IPR005175 -
Cam02g1753 361 Gene3D - 143 262 - -
Cam02g1753 361 ProSiteProfiles PPC domain profile profile. 137 278 IPR005175 -
Cam02g1753 361 CDD DUF296 143 253 IPR005175 -
Cam02g1753 361 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 36 269 IPR039605 GO:0003680(InterPro)
Cam02g1753 361 MobiDBLite consensus disorder prediction 339 361 - -
Cam02g1753 361 MobiDBLite consensus disorder prediction 1 105 - -
Cam02g1753 361 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1753 Cam-Chr2:30632156 Cam08g1372 Cam-Chr8:20042464 9.00E-40 dispersed
Cam02g1751 Cam-Chr2:30595749 Cam02g1753 Cam-Chr2:30632156 3.80E-20 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1753 - - - 0.0