Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1773 ATGTGTGTGACGGATGCAGAGCAGGTTGGGACTGAGAGACCAACTTCTGGGGTTAATAATACCAAGCCATGGCCAATACATTGTGAATTTTTGCAGAATCAGATGGGGAATCCTGATAAGGAGCCTGCTCTAACTGGAACTAGCGACCGAACTCGCTCTGGGAATTCTTTTCCTCTAGAAAGCATATCTGAGGATGCTGCCGTTATAGACAGGAAAGAGAACCCATCTACTTTTGTTCCAGCTCTTAGATCAGGAGAATGGTCTGACATCGGAAAGCGTCCTTATATGGAGGACACTCATGTATGCATTCATGACATGGCTAAGAAGTTTGGCTGTAGCTTTCTTAATGAGGAAGCTGTCTCCTTCTATGGTGTATTTGACGGTCATGGAGGAAAAGGCGCTGCACAGTTTGTTCGTGACCACTTGCCGAGAGTCATTGTTGAAGATTCTGACTTTCCTTTAGAACTTGAAAAGGTCGTCACAAGGTCATTTATGGAGACTGATGCAGCTTTTGCTAGATCTTGCACTCTTGAAACATCTCTATCTTCTGGCACAACTGCCCTGACTGCAATGATATTTGGAAGGTCTTTGCTTGTAGCAAATGCTGGTGATTGCCGAGCAGTACTGTCAAGACAAGGATGTGCAGTAGAAATGTCCAAAGACCACAGGCCATGCTGCACAAAAGAAAGAAAGCGAATCGAGGCCTTGGGCGGATTCATTGATGATGATTACCTAAACGGCCTGCTCGGTGTTACACGTGCGATAGGAGATTGGCATCTTGAAGGAATGAAGGAAATGAGTGAAAGAGGTGGACCATTAAGTGCAGAACCTGAACTTAGATTAATGACATTGACAAAGGAAGACGAGTTCTTGATCATAGGTAGTGATGGAATATGGGACGTCTTCACAAGTCAAAACGCTATCGATTTTGCTCGGAGGAGGCTCCAAGAGCACAATGATGTGAAAATTTGCTGCAAGGAAATAGTGGAGGAAGCCATAAAGAGAGGAGCAACAGACAATTTAACAGTAGTGTTGGTTAGCTTTCATTTGGAACCTCCTCCACCTGTAGTTTTTCAAAGGCCAAGATTTAGAAGAAGCATTTCTGCTGAGGGACTTCAGAACCTCAAATTTCTTCTAGAAGGATAG 1146 44.15 MCVTDAEQVGTERPTSGVNNTKPWPIHCEFLQNQMGNPDKEPALTGTSDRTRSGNSFPLESISEDAAVIDRKENPSTFVPALRSGEWSDIGKRPYMEDTHVCIHDMAKKFGCSFLNEEAVSFYGVFDGHGGKGAAQFVRDHLPRVIVEDSDFPLELEKVVTRSFMETDAAFARSCTLETSLSSGTTALTAMIFGRSLLVANAGDCRAVLSRQGCAVEMSKDHRPCCTKERKRIEALGGFIDDDYLNGLLGVTRAIGDWHLEGMKEMSERGGPLSAEPELRLMTLTKEDEFLIIGSDGIWDVFTSQNAIDFARRRLQEHNDVKICCKEIVEEAIKRGATDNLTVVLVSFHLEPPPPVVFQRPRFRRSISAEGLQNLKFLLEG 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 30886551 30891440 + CaPI482276_02g017730.1 Cam02g1773 121515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1773 381 CDD PP2Cc 83 348 IPR001932 -
Cam02g1773 381 PANTHER PROTEIN PHOSPHATASE 2C 73 348 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cam02g1773 381 FunFam Probable protein phosphatase 2C 22 67 351 - -
Cam02g1773 381 Pfam Protein phosphatase 2C 95 340 IPR001932 -
Cam02g1773 381 ProSiteProfiles PPM-type phosphatase domain profile. 83 348 IPR001932 -
Cam02g1773 381 Gene3D - 66 351 IPR036457 -
Cam02g1773 381 MobiDBLite consensus disorder prediction 1 23 - -
Cam02g1773 381 ProSitePatterns PPM-type phosphatase domain signature. 122 130 IPR000222 GO:0043169(InterPro)
Cam02g1773 381 SMART PP2C_4 73 346 IPR001932 -
Cam02g1773 381 MobiDBLite consensus disorder prediction 35 57 - -
Cam02g1773 381 SUPERFAMILY PP2C-like 73 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1773 Cam-Chr2:30886551 Cam11g1902 Cam-Chr11:31539920 1.10E-88 dispersed
Cam02g1773 Cam-Chr2:30886551 Cam09g0478 Cam-Chr9:4938292 9.40E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51535 PF00481 PP2C 7.10E-67 CL0238 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1773 K14803 - csv:101210349 727.628