Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1797 ATGGGGAGCTGTTTGTCTACTGGCAATCAGAATAGTTGCAGAAGTGGAAGGAATGGAGAGAGAGTTTCTGGATCCTGTTTGGGAATTGGAGTTTGTGGCCGGATTGAAAGAAAGAGAACATTCTCAGATCATATTTTTTCTCTGCAGCATTTGAGTTCTGTTTCTAATAGACTTGTTTATAATGGGAAGACTCGAAATTCTTGTATTTTCACTCAGCAGGGTCGAAAGGGTATAAACCAAGACGCTATGGTTGTATGGGAAGACTTCATATCAGATGGTGCAATTTTCTGTGGGGTATTTGATGGCCACGGTCCTCATGGTCATGTCGTTGCACGAAAAGTTAGAGATGTTCTGCCGAGAAAGCTAGTGTCATTCTGGCAGTCATCTCAGTTGAAGCATAATAGATCAGATAGAAGTTCTTGTCTCCCGTGGAGTCAGAAGGATTCAGCAGATGGTGAAGGACAGAACATAGATGCCTCAGAGGAGGATAAATCAAGTTCTTTATGGAGAACAGCTTTCCTCAAATCATATAAAGCCATGGATAAGGAGCTCAAGTCTCATCCCAAATTGGACTGTTTCTGTAGTGGCAGTACCGCAGTTACTCTAGTGAAGCAGGGCTCAGATCTATTTGTGGGAAGTATCGGGGATTCTCGAGCGATTCTTGGATCTAAAGACAGCAGTGATTCCCTTGTAGCAACCCAGTTGACAGTAGATCTAAAGCCTGATTTACCCAGAGAAGCTGAAAGGATAAAGAAGTGTAAAGGAAGGGTATTTGCATTGCACGACGAGCCAGAAGTGCCAAGAGTGTGGCTGCCATTTGACAATGCACCTGGATTAGCAATGGCTCGAGCATTTGGCGACTTCTGTTTGAAGGACTATGGAGTTATCTCTATCCCTGAGTTCTCACACCGTGTGCTTACAAATAATGATTTGTTTGTTGTCCTTGCTTCAGATGGGGTTTGGGACGTATTGAGCAATGAAGAGGTGGTCGAGATAGTCTATTCTGCCTCAACTCGGTCATCGGCAGCCCGGATGGTGGTAGACTCAGCTGCTCGAGAGTGGAAACTCAAGTATCCTACTTCGAAAATGGATGACTGTGCTGTCGTCTGCCTATTCTTGGACGGGAAAGTGGATTCAGAATCAGAAAATGAAGAACAAGCTTCTTCTGCAACTCTTCAAACCAACCAAATGGGTCACACCGCAGAATCAGATGATGAGCAGCAAAGGTCTGAGCCAAGTTTGCAAAGGAATTATACGGTCCGATCGTCAGAAGAAAAAGACCAAATTGGAGGATTATCTTCTTCACATAATGAAGAGAATGGAGAACCAATATCTGCTGAAGATGATAATTGGTTGGGACTGGAGGGTGTAACAAGAGTAAACTCTTTGGTTCAACTCCCCAGATTTTCTTGA 1413 43.88 MGSCLSTGNQNSCRSGRNGERVSGSCLGIGVCGRIERKRTFSDHIFSLQHLSSVSNRLVYNGKTRNSCIFTQQGRKGINQDAMVVWEDFISDGAIFCGVFDGHGPHGHVVARKVRDVLPRKLVSFWQSSQLKHNRSDRSSCLPWSQKDSADGEGQNIDASEEDKSSSLWRTAFLKSYKAMDKELKSHPKLDCFCSGSTAVTLVKQGSDLFVGSIGDSRAILGSKDSSDSLVATQLTVDLKPDLPREAERIKKCKGRVFALHDEPEVPRVWLPFDNAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTNNDLFVVLASDGVWDVLSNEEVVEIVYSASTRSSAARMVVDSAAREWKLKYPTSKMDDCAVVCLFLDGKVDSESENEEQASSATLQTNQMGHTAESDDEQQRSEPSLQRNYTVRSSEEKDQIGGLSSSHNEENGEPISAEDDNWLGLEGVTRVNSLVQLPRFS 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31062390 31064298 - CaPI482276_02g017970.1 Cam02g1797 121539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1797 470 MobiDBLite consensus disorder prediction 135 163 - -
Cam02g1797 470 MobiDBLite consensus disorder prediction 380 452 - -
Cam02g1797 470 CDD PP2Cc 72 373 IPR001932 -
Cam02g1797 470 MobiDBLite consensus disorder prediction 135 153 - -
Cam02g1797 470 MobiDBLite consensus disorder prediction 412 440 - -
Cam02g1797 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 373 IPR001932 -
Cam02g1797 470 MobiDBLite consensus disorder prediction 1 19 - -
Cam02g1797 470 SUPERFAMILY PP2C-like 63 375 IPR036457 -
Cam02g1797 470 MobiDBLite consensus disorder prediction 1 20 - -
Cam02g1797 470 SMART PP2C_4 55 371 IPR001932 -
Cam02g1797 470 MobiDBLite consensus disorder prediction 384 401 - -
Cam02g1797 470 Gene3D - 53 375 IPR036457 -
Cam02g1797 470 PANTHER PROTEIN PHOSPHATASE 67 372 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam02g1797 470 Pfam Protein phosphatase 2C 157 350 IPR001932 -
Cam02g1797 470 FunFam probable protein phosphatase 2C 52 57 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1797 Cam-Chr2:31062390 Cam03g1768 Cam-Chr3:32753353 1.40E-77 dispersed
Cam03g1066 Cam-Chr3:19505095 Cam02g1797 Cam-Chr2:31062390 8.00E-104 transposed
Cam04g0673 Cam-Chr4:21000108 Cam02g1797 Cam-Chr2:31062390 1.70E-88 transposed
Cam05g1941 Cam-Chr5:28352637 Cam02g1797 Cam-Chr2:31062390 6.80E-76 transposed
Cam08g0880 Cam-Chr8:13030032 Cam02g1797 Cam-Chr2:31062390 4.00E-109 transposed
Cam10g0353 Cam-Chr10:5720285 Cam02g1797 Cam-Chr2:31062390 5.70E-112 transposed
Cam11g0973 Cam-Chr11:16193590 Cam02g1797 Cam-Chr2:31062390 2.10E-107 transposed
Cam02g0128 Cam-Chr2:2429839 Cam02g1797 Cam-Chr2:31062390 1.70E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1797 - - - 0.0