Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1824 | ATGGGCTGCATCTGTTCTAAGGTTTTAGCTGACGAGTGTAGTGCCAATGAACATGATACCTCCAAAAGAGCTCATTCCCCAATTAAACACCTCTCTGAATTAAAAACATCAAGATCTGGCTCTCCCACATCTGAGAAAATTTGGGAGAAAGATAGGCTGAATTGTAGTGATGTTACGGTTATGTTGTTCGATACAACGGCGAATGGTTCTCTACGCTCACACGGCAAGCTTTCTAATGAGAAGAAGAGCACAGACATCCCTGATGTCACCATTATCAACCATCCATTTATGGGAAAGATTCCGAAGGCTACTGAGGCCGAGCAAGTCGCTGCCGGGTGGCCGAGTTGGCTGGCTGTGGTGGCTGGTGAAGCTATCAAAGGCTGGTTGCCAAAACGTGCAAAGAACTTCATCAAGTTAGAGAAAATTGGCCAAGGAACTTATAGCAGTGTGTATAAAGCTCGGGATATCATTCAAGATAAAGTTGTGGCCTTGAAAAGGATCAGATTTGACAATCAAGATGCTGAGAGTATCAAGTTTATGGCAAGGGAAATCCTTGTTTTGAGAAGGCTTGATCATCCAAATATAGTTAAGTTGGAAGGTTTGATCACATCACAAACATCATGTACTATGTACCTTGTTTTTGAATATATGGAACATGATCTTACCGGACTCGCATCACGGCCTGGCGCATCGTTCACCGAACCACAGATGAAGTGTTACATGAAGCAACTTTTGAGTGGACTTGATCATTGTCACAGTAATGGGGTTCTTCATAGAGACATAAAGGGCTCAAATCTTCTTATTGACAACAATGGCATTTTGAAGATAGCAGATTTTGGGTTGGCTGTTTTCTTTGATTCACATTCAACAGTTCCAATGACCAGCCGTGTAATAACTCTCTGGTATCGACCACCAGAACTTTTACTTGGAGCGTCTAAATATGGAGTTGAAGTTGATTTATGGAGTGCTGGCTGCATTCTAGGAGAGTTATATACTGGCAAGCCCATCTTACCAGGGAAAACAGAGGTTGAACAACTACATAAAATATTTAAGCTATGTGGTTCACCTTCCAAGGACTATTGGAAAAAATTGCATTTGAAGCAATCAACAAGCATGAAACCTCCACAGTCATATGAAAGATGTCTTCGAGAAACATATAACGATATTCCTCGTGCTGCTGTTGACCTTATGGACACTTTGTTATCTATAGATCCTACAGGGCGAGGAACTGCTGCTTCCGCACTCGACAGTGAGTTCTTTACAACAAGGCCCTTACCAAGCGATCCTTCAAATTTGCCAAAATACCCTCCAAGCAAAGAGATCGATTCAAAACTGCGTGAAGAGGAAGCAAGAAGGCAACAAGGAGTAGGTGGTGGGAGAAGCCAAATAGTCTACCAAGAAGCAAAAGGACTGAAGCAATCTAGAGTAGTTCCTGCTGCAAAGGCTAATGCTGAGTTGGTTATTTCATTACTGAGAAAACAAAGTCGTTCGAGCGCGAAGTACCGGAATGAAATGTATTCTTATGGTTTGGTGTCGAAAAGAACCTCAAATTCAGGACCTATAACTCAGGGACCGAGATTTACAAACAACAAAAAGGAACCAAAACATGTTTCTATGGTTTCCAGTGAGTGTTTAATATCATCTGGTCCTATTGAATTTGTTTCTTACAAATATGTCAGAGAAAGAAATGAAGTTTCAAAGCCAGAATCAATGAGCCAAGACAAAAATCTTCCTCTTCTATCCAGTTCTGCTGAAGAGTCATCCATCAAAAAGCTAAACGAAGACAAAGTTGATATGAAGAAAGTTACAAATTCTTGTCAGTTGGAAGATTCAAAGGCCTCAGCTCTAGTAGTTGGCTAA | 1860 | 41.24 | MGCICSKVLADECSANEHDTSKRAHSPIKHLSELKTSRSGSPTSEKIWEKDRLNCSDVTVMLFDTTANGSLRSHGKLSNEKKSTDIPDVTIINHPFMGKIPKATEAEQVAAGWPSWLAVVAGEAIKGWLPKRAKNFIKLEKIGQGTYSSVYKARDIIQDKVVALKRIRFDNQDAESIKFMAREILVLRRLDHPNIVKLEGLITSQTSCTMYLVFEYMEHDLTGLASRPGASFTEPQMKCYMKQLLSGLDHCHSNGVLHRDIKGSNLLIDNNGILKIADFGLAVFFDSHSTVPMTSRVITLWYRPPELLLGASKYGVEVDLWSAGCILGELYTGKPILPGKTEVEQLHKIFKLCGSPSKDYWKKLHLKQSTSMKPPQSYERCLRETYNDIPRAAVDLMDTLLSIDPTGRGTAASALDSEFFTTRPLPSDPSNLPKYPPSKEIDSKLREEEARRQQGVGGGRSQIVYQEAKGLKQSRVVPAAKANAELVISLLRKQSRSSAKYRNEMYSYGLVSKRTSNSGPITQGPRFTNNKKEPKHVSMVSSECLISSGPIEFVSYKYVRERNEVSKPESMSQDKNLPLLSSSAEESSIKKLNEDKVDMKKVTNSCQLEDSKASALVVG | 619 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31298571 | 31301059 | + | CaPI482276_02g018240.1 | Cam02g1824 | 121566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1824 | 619 | ProSitePatterns | Protein kinases ATP-binding region signature. | 142 | 165 | IPR017441 | GO:0005524(InterPro) | |
Cam02g1824 | 619 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam02g1824 | 619 | SUPERFAMILY | Protein kinase-like (PK-like) | 131 | 427 | IPR011009 | - | |
Cam02g1824 | 619 | FunFam | probable serine/threonine-protein kinase At1g54610 | 219 | 460 | - | - | |
Cam02g1824 | 619 | Gene3D | Transferase(Phosphotransferase) domain 1 | 219 | 458 | - | - | |
Cam02g1824 | 619 | ProSiteProfiles | Protein kinase domain profile. | 136 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1824 | 619 | MobiDBLite | consensus disorder prediction | 439 | 454 | - | - | |
Cam02g1824 | 619 | SMART | serkin_6 | 136 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1824 | 619 | Pfam | Protein kinase domain | 138 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1824 | 619 | MobiDBLite | consensus disorder prediction | 570 | 585 | - | - | |
Cam02g1824 | 619 | FunFam | probable serine/threonine-protein kinase At1g54610 | 123 | 218 | - | - | |
Cam02g1824 | 619 | MobiDBLite | consensus disorder prediction | 420 | 458 | - | - | |
Cam02g1824 | 619 | PANTHER | CELL DIVISION PROTEIN KINASE | 136 | 420 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cam02g1824 | 619 | CDD | STKc_CDK9_like | 136 | 420 | - | - | |
Cam02g1824 | 619 | MobiDBLite | consensus disorder prediction | 565 | 585 | - | - | |
Cam02g1824 | 619 | Gene3D | Phosphorylase Kinase; domain 1 | 123 | 218 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1824 | Cam-Chr2:31298571 | Cam05g1097 | Cam-Chr5:10044173 | 1.90E-175 | dispersed | |
Cam02g1824 | Cam-Chr2:31298571 | Cam02g1825 | Cam-Chr2:31306917 | 5.60E-167 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84978 | PF00069 | Pkinase | 1.10E-68 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1824 | - | - | - | 0.0 |