Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1842 ATGCTTTGTGAACCAATTCCAGATGGGTTCTATTCTGTTATTCCGGATAAAAGGCTGAAAGAGCGGTTTCACAGTATTCCTTCGCTGGATGAGCTTCGTGCTTTGGAGGCCGAAGGTTACAGAAACGATGTTATTCTTGTGGAGACAGAGAAAGATAAAAAGCTTTCTATGCTAAAGCAACTGATCTTGACACTGGTTAAAGGATTGAGTTCAAATCCAGCTGCAATTATCAAGAAGATTGCTGGACTGGTTTCTGATTTTTATAAACGACCAATTTTAGAAAGTCCAGCAAAAGCTGCTCTAGAAGAAAACTCCCACTTGTTCGAGGATAGAGGCATTCAATTACTTGGACAAATAAAATTTGGTTCTTGCCGTCCAAGAGCTATCTTATTTAAGGCTCTGGCGGACACTGTAGGGCTTGAAAGCCGTCTCATGGTGGGCTTGCCTAATGAGGGGGCTATTGGGTGCGTGGACTCATACAAGCATATGTCTGTGACAGTTGTGTTGAATTCTGTGGAACTAGTTGTTGATCTGATGCGATTCCCTGGCCAGTTGTTACCTCGGTCAACTAAGGCAATTTTTATGACCCATATTTCTGCTGCTGGTGAAAGCGATTCTGCAGAAAACGATTCCTGTGATTCACCACTAGAACCTAATAGTCCTCTTTATGGTTTCTCAGAAAGAGTTGATCCTGACAGTGCTGAGAAAGATGAGAGCCTTCAATTCCACAGAAAATTTGAAGCAGCTTCAAATGCATATGGTCATTCATTGCGCAACATGATGTTGCGATCAAGTACAACACTTGACAGGAAACTGAGTTTATCACATAGTGAACCTAACATTGCAAATGCATTTTGGCGACGTAGTCGGAGAAAGGATATTGCTGAACAGCGGACTGCTAGTTCAAGTCCAGAGCATCCTTCATTTCGGGCGCGTGGCCGGTCGATGCTTAGTGGGGATAGGAAAGCCTTCAGAGATTTTTCTGATGATGTCTCTACTTCAAGATCAGATGGCGCTTCAACTTCAACTTCAGAAGCACGTCGATTAAGAAGAAGGAGCATCAGCATTACTCCAGAGATTGGTGATGATATCGTGAGGGCTGTACGAGCAATGAGTGAAACATTGAAGCAAAATCGTCTTTTGAGAGGGCAAGAAGATGACAGGTCGTTCTCCCACCCTTCAAATGAAAGAAATAGTAGTTCAGATGTTCAGAGAAATGATCAAGTGGGCTCTCAAAGAGCAATATCATTACCATCATCGCCACATGTGTATAGGGGTCAAACCTCTGATAGAATTGGGCATTCAGCATATCCGAATCATGAATTAGCCTCAAAATGGACTAAAGTTCTTGAATCTTTCTCCTTGGATGACAAACCACTATTACCTTACCCAGAGTGGAACATCGATTACTCAGAACTGACAGTTGGAATCCGTATTGGAATTGGGTTTTTTGGAGAAGTTTTTCGTGGCATTTGGAATGGAACAGATGTGGCAATCAAAGTTTTCCTAGAGCAAGATCTAACTCCTGAAAACATTGAAGACTTCTGTAACGAGATATCAATTCTTAGTCGTCTTCGACATCCTAATGTTATACTATTTCTGGGGGCATGCACAAAGCCGCCACGCTTATCAATGATCACCGAATACATGGAGATGGGTTCCTTGTATTCCTTGATCCATTTGAGTGGTCAGAAGAAAAAACTTAGCTGGCGGAGGAGACTGAAGATGTTGCGTGACATATGCAGGGGTTTGATGTGCATACACCGAATGAAAATAGCTCATCGGGACCTAAAAAGTGCAAATTGCCTAGTGAACAAGCACTGGACCGTCAAGATATGTGATTTTGGACTTTCAAGAATATTGACAGATGCTCCAGCAAGAGGGTCTCCATCTGCAGGAACTCCAGAATGGATGGCTCCTGAGCTCTTTCGAAATGAGCCCTTCACTGAAAAGTGTGATATTTTCAGCCTGGGGGTCATTATGTGGGAGCTATGCACGCTAAATAGACCATGGGAGGGTGTTCCACCGGAGCGGGTAGTTTATGCTGTTGGCACTGAGGGATCCCGCCTCGAGATTCCCGAAGGCCCGCTTGGCAGACTTATATCAGATTGTTGGGCGGAACCAAATGAACGGCCAAGCTGCGAAGAGATTCTCTCACGCTTGCTGGACTGCGAGTACTCACTTTCTTGA 2190 43.88 MLCEPIPDGFYSVIPDKRLKERFHSIPSLDELRALEAEGYRNDVILVETEKDKKLSMLKQLILTLVKGLSSNPAAIIKKIAGLVSDFYKRPILESPAKAALEENSHLFEDRGIQLLGQIKFGSCRPRAILFKALADTVGLESRLMVGLPNEGAIGCVDSYKHMSVTVVLNSVELVVDLMRFPGQLLPRSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGFSERVDPDSAEKDESLQFHRKFEAASNAYGHSLRNMMLRSSTTLDRKLSLSHSEPNIANAFWRRSRRKDIAEQRTASSSPEHPSFRARGRSMLSGDRKAFRDFSDDVSTSRSDGASTSTSEARRLRRRSISITPEIGDDIVRAVRAMSETLKQNRLLRGQEDDRSFSHPSNERNSSSDVQRNDQVGSQRAISLPSSPHVYRGQTSDRIGHSAYPNHELASKWTKVLESFSLDDKPLLPYPEWNIDYSELTVGIRIGIGFFGEVFRGIWNGTDVAIKVFLEQDLTPENIEDFCNEISILSRLRHPNVILFLGACTKPPRLSMITEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIAHRDLKSANCLVNKHWTVKICDFGLSRILTDAPARGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVGTEGSRLEIPEGPLGRLISDCWAEPNERPSCEEILSRLLDCEYSLS 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 31469777 31478594 - CaPI482276_02g018420.1 Cam02g1842 121584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1842 729 PANTHER SERINE-THREONINE PROTEIN KINASE 252 721 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam02g1842 729 ProSitePatterns Protein kinases ATP-binding region signature. 479 500 IPR017441 GO:0005524(InterPro)
Cam02g1842 729 SUPERFAMILY Protein kinase-like (PK-like) 449 721 IPR011009 -
Cam02g1842 729 MobiDBLite consensus disorder prediction 394 426 - -
Cam02g1842 729 MobiDBLite consensus disorder prediction 204 237 - -
Cam02g1842 729 CDD STKc_MAP3K-like 479 721 - -
Cam02g1842 729 MobiDBLite consensus disorder prediction 379 393 - -
Cam02g1842 729 ProSiteProfiles Protein kinase domain profile. 473 728 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1842 729 Gene3D Transferase(Phosphotransferase) domain 1 552 728 - -
Cam02g1842 729 Pfam Ethylene-responsive protein kinase Le-CTR1 4 185 - -
Cam02g1842 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1842 729 MobiDBLite consensus disorder prediction 293 350 - -
Cam02g1842 729 Gene3D Phosphorylase Kinase; domain 1 466 551 - -
Cam02g1842 729 MobiDBLite consensus disorder prediction 315 332 - -
Cam02g1842 729 SMART serkin_6 473 722 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1842 729 Pfam Protein tyrosine and serine/threonine kinase 475 721 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1842 729 MobiDBLite consensus disorder prediction 377 431 - -
Cam02g1842 729 FunFam Serine/threonine-protein kinase isoform 1 464 551 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1842 Cam-Chr2:31469777 Cam05g1951 Cam-Chr5:28405675 3.30E-73 dispersed
Cam02g1842 Cam-Chr2:31469777 Cam10g1900 Cam-Chr10:33075448 5.80E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84980 PF07714 PK_Tyr_Ser-Thr 3.70E-59 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1842 - - - 0.0