Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1872 | ATGCGAAAATTTAATTCCGTGTGTCAGAGCAAGAAAGAGAAGAGCTGGAAGGGCAGAAGACATCGAATATCCGTCTTGATCCTGAAGCCTTTCTCCTTCCTTCTTTATCTCTTCCCTATAAAGCCGCAGTTTCTGCAGTCACACTTCTTTCCAAGATCATCATCATCATCATCATCATCTGCTTCTTCATCGTCGTCGTCATCTTCGTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCTGTAATGAAATTCGAAGAGCAGAACCTGAAGCATCAATCTGAACAGATGTGCAGGACTATTGAGGTGGATACAATTGATCACCATCGCAGTATTTCGTCGCTACTCGTAATGGAAGCTTCCGAAGACTGCGACAGGGACGGTGACGGCCTCTATATTCCTCCTCTCAACTTTTCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTCCTAACTTCTCCTTCCTCCAAACCCTAGGTCTCCGTTCCATTATATGTTTATGTCCGGAGCCGTATCCGGAACACAACATGGAGTTCCTCAAGTCGAACGGGATTAGATTGTTTCAATTTGGAATCGAAAGCAATAAGGAGCCTTTCGTGAACATCCCAGATGATATGATTCGTGAAGCACTGAAAGTTGTCCTTGACGATAGAAATCATCCGGTTCTCATACATTGCAAAAGAGGAAAGCATCGGACAGGTTGTCTTGTGGGATGCCTGAGAAAAGTGCAGAGGTGGTGCCTCACTTCTGTGTTTGATGAGTACCAAAGGTTTGCAGCTGCAAAAGCAAGAATTTCAGACCAGAGGTTCATGGAGTTGTTTGATATCTCTGGCTTGAAGCATCTTCCCATGTCATTCTCATGCTCAAAGAGCTGTATGCTCATCTCTATCTCTGGTTCCTTCCAAGACGAAAGCTCGAAGCTCAGTGGAAAAAGTGTACTGGAAACTGGGCCTTCTTTATATGAAATGATTATTAACATTATGGAATTTCAGTCTCTTGATAAAAATGATTGGAGTGGCATTTCAAAGTTGGTGGTGCTTATGCGGTGTAAACTTCGCTGGAGTTCTTCCTCAGTGAGCCTGGCTGGTGCTTAA | 1125 | 44.0 | MRKFNSVCQSKKEKSWKGRRHRISVLILKPFSFLLYLFPIKPQFLQSHFFPRSSSSSSSSASSSSSSSSSSSSSSSSSSSSSSSSSSAVMKFEEQNLKHQSEQMCRTIEVDTIDHHRSISSLLVMEASEDCDRDGDGLYIPPLNFSMVDNGIFRSGFPDSPNFSFLQTLGLRSIICLCPEPYPEHNMEFLKSNGIRLFQFGIESNKEPFVNIPDDMIREALKVVLDDRNHPVLIHCKRGKHRTGCLVGCLRKVQRWCLTSVFDEYQRFAAAKARISDQRFMELFDISGLKHLPMSFSCSKSCMLISISGSFQDESSKLSGKSVLETGPSLYEMIINIMEFQSLDKNDWSGISKLVVLMRCKLRWSSSSVSLAGA | 374 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 31755175 | 31758788 | - | CaPI482276_02g018720.1 | Cam02g1872 | 121614 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1872 | 374 | Pfam | Tyrosine phosphatase family | 139 | 290 | IPR004861 | - | |
Cam02g1872 | 374 | PANTHER | TYROSINE-PROTEIN PHOSPHATASE | 83 | 295 | - | GO:0005737(PANTHER)|GO:0016791(PANTHER) | |
Cam02g1872 | 374 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 234 | 244 | IPR016130 | GO:0016311(InterPro) | |
Cam02g1872 | 374 | Gene3D | Protein tyrosine phosphatase superfamily | 139 | 288 | IPR029021 | - | |
Cam02g1872 | 374 | CDD | PFA-DSP_Siw14 | 138 | 285 | - | - | |
Cam02g1872 | 374 | PRINTS | Plant and fungal dual specificity phosphatase signature | 176 | 189 | IPR020428 | GO:0016791(InterPro) | |
Cam02g1872 | 374 | PRINTS | Plant and fungal dual specificity phosphatase signature | 195 | 209 | IPR020428 | GO:0016791(InterPro) | |
Cam02g1872 | 374 | PRINTS | Plant and fungal dual specificity phosphatase signature | 139 | 156 | IPR020428 | GO:0016791(InterPro) | |
Cam02g1872 | 374 | PRINTS | Plant and fungal dual specificity phosphatase signature | 212 | 226 | IPR020428 | GO:0016791(InterPro) | |
Cam02g1872 | 374 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 144 | 298 | IPR020422 | GO:0006470(InterPro) | |
Cam02g1872 | 374 | FunFam | probable tyrosine-protein phosphatase At1g05000 | 138 | 288 | - | - | |
Cam02g1872 | 374 | MobiDBLite | consensus disorder prediction | 57 | 85 | - | - | |
Cam02g1872 | 374 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 207 | 247 | IPR000387 | GO:0016311(InterPro) | |
Cam02g1872 | 374 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 140 | 286 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1077 | Cam-Chr3:19925367 | Cam02g1872 | Cam-Chr2:31755175 | 2.40E-63 | transposed | |
Cam02g1872 | Cam-Chr2:31755175 | Cam09g1098 | Cam-Chr9:11462246 | 5.70E-82 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1872 | K18045 | - | csv:101222170 | 416.387 |