Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1903 ATGGATGATCTTGGAGCTTCCATTTCATCGGTCGATTCCGAGTTATTTCGCCGCTTTAATTCTAAAGGGAATTTGAGATTGAGGGGGAGGTGTAGATTTCTAGGTGTCATTGGAATTCTTTGTGTAAAAATAGAAGTGGGGGGTCGATTTGCTTTAGGTTTATTGGGTTTTGGTTTGATGGAGGATTGGGGAAGGTTCATGGAAAAGTGGGCTTCTGCACTTGTGATCCGAATGCAGCAAGATCAAGCCAAAAAGAATTCAACCGAAGTGGAGTTCTTTTCTGATTATGGCGATGCGAGTAGATACAAAATTCAGGAAGTAATCGGGAAAGGAAGCTATGGGGTTGTCTGTTCCGCAATTGACACCCGCACCGGCGACAAGGTTGCAATAAAGAAGATACATAATATTTTTGAGCATATATCTGACGCGGTTAGAATTCTTCGTGAGATAAAGCTGCTTAGACTTCTTCGCCATCCTGATATTGTTGAAATTAAACACATTATGCTGCCACCTTCAAGGAGGGATTTCAAAGACATCTACGTTGTTTTCGAGCTCATGGAATCAGATCTCCACCAAGTTATTAAAGCAAATGATGATCTGACTCGAGAACATTATCAGTTTTTCCTTTACCAACTTCTTCGTGCATTAAAATATATCCATACAGCGAATGTCTACCATCGTGATTTAAAACCAAAGAATATATTAGCAAATGCAAATTGTAAACTTAAAATTTGTGATTTTGGATTAGCAAGAGTTGCCTTCAGTGACACACCAACAACAATTTTCTGGACGGATTATGTTGCTACTAGATGGTACCGAGCTCCAGAGCTGTGTGGTTCATTTTTCTCGAAGTATACACCTGCAATTGATATATGGAGTATTGGCTGCATATTTGCTGAAGTATTAATGGGGAAGCCACTTTTTCCTGGTAAAAACGTTGTCCACCAGCTCGATTTGATGACAGATCTCCTTGGAACTCCTTCATTAGATACAATCTCCAGGGTACGTAATGACAAGGCTAGAAGATATTTAACTACTATGAGGAAAAAGCAGCCGGTACCATTTTCTCAAAAGTTCCCAAATGCAGATCCATTAGCGCTGAGGCTACTAGAAAGACTGCTTGCTTTTGATCCAAAAGATAGACCAACTGCTGAAGAGGCACTGGCTGATCCATACTTCAAGGGATTGGCAAAAATTGAGAGGGAACCTTCCTGCCAGCCAATCACAAAGATGGAATTTGAATTTGAGAGACGGAGGGTCACAAAAGAAGACATTCAAGAGCTAATCTTCCGGGAGATACTAGAATATCATCCTCAGCTACTAAAAGACTACATGAATGGGACGGAGAGAACGAATTTTCTATATCCAAGTGCTGTTGACCAATTTAGAAAGCAGTTTGCGCATCTGGAGGAAAATGGTGGTAAAAGTGCGCCAGTTATTCCTCTTGACAGAAAGCATGTGTCCCTTCCAAGGTCAACAGTTGTACACTCGAACCCGGTCTATTCTAAGGACCAAGTAAATAATGTAACTCTCCAAGATGGGAAGATCTCTGAAGAGGCATACGGCAAGAATTCCCGAGATAGTGAAGGACGGCTAACAAATATATCGAGGGCCATGCAGGCACCACAAAAAATCCCATTTGCAGCTAAGCCTGGAAGAGTGGTTGGACCGGTTATAGCAGATGAGAATGGGAGGCTGGTGAAGGAACCATACGATCCAAGAACGTTGATCAGAGGTGCCATTCTTCCTCCTGCATATCACTACCACCAAAAACCCGTTGCTGGAAATCAAGAAAGATCTGCAGCAGAAACTAAACTTGATATTTCTTTAAGGGCCGCTAAGCAAGCATCCCAGTGTGGCATGGCTTCCAAATTAGGATCAGATATTGCCATCAGCATCGACTCGAACCCCTTTTACATGACACGTGCCGGAGTGAACAAGGTCGAACTCAAGGACCAAATATCCATCGATGCAAACTTTCTTCAGGCCAAGGCCGCCCAATACGGTGGTCTTAGTGCAGCAACAGCCACCGCCACATCGGTTGCTCACAGAAAGGTGGTTGCGGGAATATTAATGGAGAACGAGATTAATATTGTAAATGACGGGGCATCGGGGGACGATCAGACCGCAGAGGATTTTTATGATGTTGACCAGCGGGAGAACGATGCAAAGGTCGCGGAGCTGAACCATAGAATTGAGGTTTTGGAGCGTGAAAAGAAAAAATTGGTTGATGAAAATGAAGAAATCAAAGATAAGATTAAAAGGTTGTCAGCGGAGATTGAAGGGTTGAAGAGTGAAGAGGGGAGGCTGATAGAACAACTGAAAGAAATGGAGAAACAAGTTGAACGTGCTGAAGAGGGAAATAAGGTGGTAGAGTCGGTTGCGGCGAGGGCACTGGAGCTTGAGACTGAAGTCTCGAGGCTACAGCATGATTTGATATCTGCAATGAATGGAGCTGATGAGGCGAATGCTGAAGTTGCGGAGTTGAGGAAAAATTTGGGGGAAAAGGGAGTGAAGGTTGCAGCTCTGGAGGAAGAGTTGGAAGCCCTGAAGAAAGCAAAGGCAGAGAGTGAAAAGAAAGTCAGAGAATTGGAGAGGAAAGTTGGGGTTTTGGAGGTCAAGGAGATAGAGGAGAAGAGTAAAAAAGTTAGGGTAGAGGAGGAAATGAGAGACAAAATTGAGGAGAAAGAGAGGGAAATCACCGGTTTCAAAAAGACTATTGAGAATTTGGAATTGGTGGTAACAAAGAACGGCCTGGAATTAGATAAGTGGATCAAGGAGAAACTTAAGGTGGAAGAGTTGTTGAAGGAGTCAGAGGAGAAAACGAAAATGTTTGAGTTGAAAATGGTTCAGTTGCAGAAGGAAGTAGAGGAAGCACACAAAGTCATTAGTGGATTAAAGGAGAAAGCGGTGAATGCGTTGAATGGAACTGCAGAGGAACTCAAGTCGGCTTTTGAAGGTGCAGAGAAGGAGTTGAATTTGAACTGGCCTATAATTGCAGGTTCAACAGGAGTTGTTGCTGCCGTCGCTGCACTGGCCTTTGTTTTGTATGGAAGGCAAAGATAG 3066 43.22 MDDLGASISSVDSELFRRFNSKGNLRLRGRCRFLGVIGILCVKIEVGGRFALGLLGFGLMEDWGRFMEKWASALVIRMQQDQAKKNSTEVEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTRTGDKVAIKKIHNIFEHISDAVRILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTTMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPITKMEFEFERRRVTKEDIQELIFREILEYHPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEENGGKSAPVIPLDRKHVSLPRSTVVHSNPVYSKDQVNNVTLQDGKISEEAYGKNSRDSEGRLTNISRAMQAPQKIPFAAKPGRVVGPVIADENGRLVKEPYDPRTLIRGAILPPAYHYHQKPVAGNQERSAAETKLDISLRAAKQASQCGMASKLGSDIAISIDSNPFYMTRAGVNKVELKDQISIDANFLQAKAAQYGGLSAATATATSVAHRKVVAGILMENEINIVNDGASGDDQTAEDFYDVDQRENDAKVAELNHRIEVLEREKKKLVDENEEIKDKIKRLSAEIEGLKSEEGRLIEQLKEMEKQVERAEEGNKVVESVAARALELETEVSRLQHDLISAMNGADEANAEVAELRKNLGEKGVKVAALEEELEALKKAKAESEKKVRELERKVGVLEVKEIEEKSKKVRVEEEMRDKIEEKEREITGFKKTIENLELVVTKNGLELDKWIKEKLKVEELLKESEEKTKMFELKMVQLQKEVEEAHKVISGLKEKAVNALNGTAEELKSAFEGAEKELNLNWPIIAGSTGVVAAVAALAFVLYGRQR 1021
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32077271 32085585 - CaPI482276_02g019030.1 Cam02g1903 121645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1903 1021 ProSitePatterns MAP kinase signature. 137 240 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1903 1021 Coils Coil 921 969 - -
Cam02g1903 1021 FunFam Mitogen-activated protein kinase 188 416 - -
Cam02g1903 1021 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 99 434 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam02g1903 1021 Gene3D - 714 885 - -
Cam02g1903 1021 Gene3D Phosphorylase Kinase; domain 1 117 439 - -
Cam02g1903 1021 ProSitePatterns Protein kinases ATP-binding region signature. 108 132 IPR017441 GO:0005524(InterPro)
Cam02g1903 1021 Coils Coil 971 991 - -
Cam02g1903 1021 SUPERFAMILY Protein kinase-like (PK-like) 98 397 IPR011009 -
Cam02g1903 1021 Coils Coil 876 913 - -
Cam02g1903 1021 Coils Coil 718 874 - -
Cam02g1903 1021 Gene3D Transferase(Phosphotransferase) domain 1 188 416 - -
Cam02g1903 1021 PRINTS Tropomyosin signature 875 898 IPR000533 -
Cam02g1903 1021 PRINTS Tropomyosin signature 934 959 IPR000533 -
Cam02g1903 1021 PRINTS Tropomyosin signature 844 872 IPR000533 -
Cam02g1903 1021 PRINTS Tropomyosin signature 724 741 IPR000533 -
Cam02g1903 1021 FunFam Mitogen-activated protein kinase 92 195 - -
Cam02g1903 1021 CDD STKc_TDY_MAPK 101 438 - -
Cam02g1903 1021 SMART serkin_6 102 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1903 1021 ProSiteProfiles Protein kinase domain profile. 102 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1903 1021 Pfam Protein kinase domain 102 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1903 Cam-Chr2:32077271 Cam07g1060 Cam-Chr7:24961227 3.50E-206 dispersed
Cam06g0579 Cam-Chr6:7831226 Cam02g1903 Cam-Chr2:32077271 1.40E-212 transposed
Cam02g1903 Cam-Chr2:32077271 Cam09g2271 Cam-Chr9:37215197 1.70E-248 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84983 PF00069 Pkinase 4.30E-66 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1903 - - - 0.0