Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1906 ATGAATGTCCCCATTTTGCTTTTCAGCAAAAACCCGATTCGACCCGGCTTAAAGGCTTTGAATTTGGAGTTTTGGGGACTTGGGATTCAATTGGATTGGGAATTCAATTTTTGGACAACATTTTGGCATATCCCCCCAATGCTTTTTGGGTCTCCGTTGGTTAAACACGATTCGCTTTATTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCAATCTTCGATTACTACATGAGCTTTGTTCTCTTTTGTATGACAAAGTGGACAAGAGTTGATGACCTAAAATTATGTTCAATGAAAAGAACTCAAGAATTGATGATGCTTGTAAAGATCTCAGTGAGACATGGGGTCCTTAGTCCTTATCTCATACCTGAATTTCCAGATGGGCATGTGTTGAAATTTGTTAAGAGCTTGAACTTGAAGTTTTCTTTGGCTTGGAGCTTTAGTAAACAGTTGATCAGATATGGCATCTGGGAGATAGATCAGGTTGGGATTCAAATTCCCAATGACCACCCTGAAAATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGGCTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACTGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTACGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGACAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACCGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG 1794 43.59 MNVPILLFSKNPIRPGLKALNLEFWGLGIQLDWEFNFWTTFWHIPPMLFGSPLVKHDSLYFPFWVPGGRGKSGSIFDYYMSFVLFCMTKWTRVDDLKLCSMKRTQELMMLVKISVRHGVLSPYLIPEFPDGHVLKFVKSLNLKFSLAWSFSKQLIRYGIWEIDQVGIQIPNDHPENRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32123309 32127945 - CaPI482276_02g019060.1 Cam02g1906 121648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1906 597 Gene3D Phosphorylase Kinase; domain 1 259 352 - -
Cam02g1906 597 Pfam Protein kinase domain 278 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1906 597 Coils Coil 297 317 - -
Cam02g1906 597 ProSiteProfiles Protein kinase domain profile. 277 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1906 597 ProSitePatterns Protein kinases ATP-binding region signature. 283 306 IPR017441 GO:0005524(InterPro)
Cam02g1906 597 SUPERFAMILY Protein kinase-like (PK-like) 261 553 IPR011009 -
Cam02g1906 597 FunFam Putative receptor-like protein kinase 259 352 - -
Cam02g1906 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g1906 597 MobiDBLite consensus disorder prediction 199 234 - -
Cam02g1906 597 SMART serkin_6 277 531 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g1906 597 MobiDBLite consensus disorder prediction 556 597 - -
Cam02g1906 597 CDD STKc_IRAK 283 549 - -
Cam02g1906 597 Gene3D Transferase(Phosphotransferase) domain 1 353 566 - -
Cam02g1906 597 MobiDBLite consensus disorder prediction 190 235 - -
Cam02g1906 597 MobiDBLite consensus disorder prediction 556 570 - -
Cam02g1906 597 PANTHER OS01G0323000 PROTEIN 175 571 IPR052232 -
Cam02g1906 597 FunFam Putative receptor-like serine/threonine-protein kinase 353 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1906 Cam-Chr2:32123309 Cam06g0416 Cam-Chr6:6284928 1.50E-145 dispersed
Cam02g1906 Cam-Chr2:32123309 Cam09g2283 Cam-Chr9:37299108 1.10E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84984 PF00069 Pkinase 2.50E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1906 - - - 0.0