Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g1906 | ATGAATGTCCCCATTTTGCTTTTCAGCAAAAACCCGATTCGACCCGGCTTAAAGGCTTTGAATTTGGAGTTTTGGGGACTTGGGATTCAATTGGATTGGGAATTCAATTTTTGGACAACATTTTGGCATATCCCCCCAATGCTTTTTGGGTCTCCGTTGGTTAAACACGATTCGCTTTATTTCCCTTTCTGGGTTCCTGGAGGAAGGGGCAAATCTGGGTCAATCTTCGATTACTACATGAGCTTTGTTCTCTTTTGTATGACAAAGTGGACAAGAGTTGATGACCTAAAATTATGTTCAATGAAAAGAACTCAAGAATTGATGATGCTTGTAAAGATCTCAGTGAGACATGGGGTCCTTAGTCCTTATCTCATACCTGAATTTCCAGATGGGCATGTGTTGAAATTTGTTAAGAGCTTGAACTTGAAGTTTTCTTTGGCTTGGAGCTTTAGTAAACAGTTGATCAGATATGGCATCTGGGAGATAGATCAGGTTGGGATTCAAATTCCCAATGACCACCCTGAAAATAGACTTCTTTCAGTTGATGTCAAAAGAAATGAAGAAAATTCAGAAGTTATGGCTGTGACAAAATCAAGTGAACATGATAACCATAGCCAATGCAGTTCCACTTACCAACATGAAAAAGCTGGCAATCCACAATCAGGGGAAGAAGGAAGCTCTGGAAATGCTAGGAAGCAGGCTTCGAGGTCGTATGGAGGATATGGAGGAATTGTGCCACCGTCTCCTCTTGTTGGCTTGCCAGAAATCTCACATCTTGGGTGGGGCCACTGGTTCACTCTCAGGGATCTAGAGCTTGCAACTAATCGCTTTTCTACTGAAAATATTCTTGGGGAAGGGGGATATGGGGTTGTGTATAAAGGCAGACTCATCAATGGCACTGAGGTTGCAGTGAAAAAACTACTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGTTGAAGTGGAGGCTATTGGTCACGTTCGGCATAAGAATCTTGTCCGACTGCTGGGTTATTGCATAGAGGGAGTTCATAGGATGCTAGTATATGAATATGTGAACAATGGCAATCTAGAACAGTGGCTACATGGAGCCATGTGCCAGCATGGCACGCTTACTTGGGAGGCTCGCATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTTGCGTATTTACACGAAGCAATTGAGCCAAAAGTTGTTCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAAGTTTCTGATTTCGGATTGGCCAAACTCTTGGGCTCTGGAGAGAGTCACATCACAACTAGAGTTATGGGAACATTTGGGTATGTGGCACCAGAATATGCAAATACGGGCTTGTTGAATGAAAAGAGTGACATTTATAGCTTCGGTGTTCTCCTGCTAGAAGCAATTACAGGGAGGGACCCTGTGGATTACGCACGTCCTTCTAATGAGGTTAATCTGGTTGAGTGGCTAAAGATGATGGTAGCAACAAGGAGAGCAGAGGAAGTTGTGGACATGAACCTTGAGATCAAGCCAACTACTCGTGCTTTGAAACGTGCCCTTCTTGTTGCACTTAGGTGTATTGATCCTGAATCAATCAAGAGACCCAAGATGAGTCAAGTTGTAAGAATGCTTGAAGCCGACGAATTTCCACTCCACGAGGACAGAAGGAACCGAAAAAGCCGATCGATAAGCTTGGAGATCGAGTCAATGAAAGAAATATCAGGTCCAGAGCAGACCGGTGGGCCGTCCGAGAGCCATAAATCAGAGACAAGCCATGAATAG | 1794 | 43.59 | MNVPILLFSKNPIRPGLKALNLEFWGLGIQLDWEFNFWTTFWHIPPMLFGSPLVKHDSLYFPFWVPGGRGKSGSIFDYYMSFVLFCMTKWTRVDDLKLCSMKRTQELMMLVKISVRHGVLSPYLIPEFPDGHVLKFVKSLNLKFSLAWSFSKQLIRYGIWEIDQVGIQIPNDHPENRLLSVDVKRNEENSEVMAVTKSSEHDNHSQCSSTYQHEKAGNPQSGEEGSSGNARKQASRSYGGYGGIVPPSPLVGLPEISHLGWGHWFTLRDLELATNRFSTENILGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMCQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLGSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYARPSNEVNLVEWLKMMVATRRAEEVVDMNLEIKPTTRALKRALLVALRCIDPESIKRPKMSQVVRMLEADEFPLHEDRRNRKSRSISLEIESMKEISGPEQTGGPSESHKSETSHE | 597 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 32123309 | 32127945 | - | CaPI482276_02g019060.1 | Cam02g1906 | 121648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g1906 | 597 | Gene3D | Phosphorylase Kinase; domain 1 | 259 | 352 | - | - | |
Cam02g1906 | 597 | Pfam | Protein kinase domain | 278 | 546 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1906 | 597 | Coils | Coil | 297 | 317 | - | - | |
Cam02g1906 | 597 | ProSiteProfiles | Protein kinase domain profile. | 277 | 541 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1906 | 597 | ProSitePatterns | Protein kinases ATP-binding region signature. | 283 | 306 | IPR017441 | GO:0005524(InterPro) | |
Cam02g1906 | 597 | SUPERFAMILY | Protein kinase-like (PK-like) | 261 | 553 | IPR011009 | - | |
Cam02g1906 | 597 | FunFam | Putative receptor-like protein kinase | 259 | 352 | - | - | |
Cam02g1906 | 597 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 399 | 411 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam02g1906 | 597 | MobiDBLite | consensus disorder prediction | 199 | 234 | - | - | |
Cam02g1906 | 597 | SMART | serkin_6 | 277 | 531 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g1906 | 597 | MobiDBLite | consensus disorder prediction | 556 | 597 | - | - | |
Cam02g1906 | 597 | CDD | STKc_IRAK | 283 | 549 | - | - | |
Cam02g1906 | 597 | Gene3D | Transferase(Phosphotransferase) domain 1 | 353 | 566 | - | - | |
Cam02g1906 | 597 | MobiDBLite | consensus disorder prediction | 190 | 235 | - | - | |
Cam02g1906 | 597 | MobiDBLite | consensus disorder prediction | 556 | 570 | - | - | |
Cam02g1906 | 597 | PANTHER | OS01G0323000 PROTEIN | 175 | 571 | IPR052232 | - | |
Cam02g1906 | 597 | FunFam | Putative receptor-like serine/threonine-protein kinase | 353 | 563 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1906 | Cam-Chr2:32123309 | Cam06g0416 | Cam-Chr6:6284928 | 1.50E-145 | dispersed | |
Cam02g1906 | Cam-Chr2:32123309 | Cam09g2283 | Cam-Chr9:37299108 | 1.10E-191 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
84984 | PF00069 | Pkinase | 2.50E-48 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g1906 | - | - | - | 0.0 |