Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1937 ATGGCAGATAATCCTAGAACAGATTCCTTCAGAACAGAGCTTTTGTCCCCCGAGAGCGTGGCTGCGGGAACAGATGGAATGGTAACGAAGGTGCCCTCGTGGCGACTCAATATGGACGAGTTCCGCTTGCCTACTGCAAACACGAGTTCTCATCATGGCATTGTTTATTACTGGAAGTCATGGAACAGGCAGAGAAAGGTTGCTAAGTATTATGAAAGGCAGGAAAGTCTTCTCAAAGGATTCAATGAAGTTGACTCCTACAATGAACTGGGTATCGTGCCTGGAACTTTAACTGAGGATGAAAAGAAGCAAGAGGCGATCAGTGAGAGACGGGCAATATATGCATCCAACATAGCCAACATGTTGATCTTCATCGCTAAAGTTTATGCTTCAGTTGAAAGCAGATCACTAGCAGTTATAGCTTCAACACTAGATTCCCTGTTGGATCTTTTATCGGGGTTCATATTATGGTTTACAGCTAATGCTATGAGAAAGCCAAATCAGTACCGTTATCCTATCGGCAAGAATCGAATGCAACCAGTGGGAATTGTTGTGTTTGCATCAGTCATGGCAACTCTTGGAATACAAATATTGCTTGAATCAGCTAGAGAACTTATTTCAAAGGTTCAACCGGATAGAGATCCAGATAGAGTAAAATGGATGGTTGGAATAATGGCATCCGTGACAGTAGTGAAATTTTGCCTTACAATATACTGTCGTAGATTCACAAATGAAATCATCAGAGCCTATGCCCAAGACCATTTCTTTGATGTAATTACCAATTCAATTGGTCTTGCGACTGCCCTTTTGGCCATCAAATTCTACTGGTGGCTTGATCCCCTTGGGGCTATCCTAATAGCATTGTACACTATCAGCAACTGGTCGAAGACCGTAATGGAAAATGTATGGTCGCTAATAGGGAGGACAGCCCCACCGGACTACTTGGCCAAGCTAACATATCTAGTATGGAATCATCACGAGGAAATCAAACATATTGATACAGTGAGAGCGTATACCTTCGGATGCAACTATTTTGTGGAGGTGGACATAGTGTTGCCTGGGGAAACTTCTCTAAGTCAAGCACATGACATTGGAGAAACACTTCAAGATAAACTTGAACAGCTTGATGAGGTTGATCGAGCTTTCGTTCATGTGGACTTTGAGTTCACTCATAAGCCAGAGCACAAGCCTAAAGCTTCATAG 1203 42.81 MADNPRTDSFRTELLSPESVAAGTDGMVTKVPSWRLNMDEFRLPTANTSSHHGIVYYWKSWNRQRKVAKYYERQESLLKGFNEVDSYNELGIVPGTLTEDEKKQEAISERRAIYASNIANMLIFIAKVYASVESRSLAVIASTLDSLLDLLSGFILWFTANAMRKPNQYRYPIGKNRMQPVGIVVFASVMATLGIQILLESARELISKVQPDRDPDRVKWMVGIMASVTVVKFCLTIYCRRFTNEIIRAYAQDHFFDVITNSIGLATALLAIKFYWWLDPLGAILIALYTISNWSKTVMENVWSLIGRTAPPDYLAKLTYLVWNHHEEIKHIDTVRAYTFGCNYFVEVDIVLPGETSLSQAHDIGETLQDKLEQLDEVDRAFVHVDFEFTHKPEHKPKAS 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32476223 32478090 + CaPI482276_02g019370.1 Cam02g1937 121679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1937 400 FunFam Metal tolerance protein 11 308 388 - -
Cam02g1937 400 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 32 396 IPR050291 GO:0008324(PANTHER)|GO:0016020(PANTHER)
Cam02g1937 400 Pfam Dimerisation domain of Zinc Transporter 315 386 IPR027470 -
Cam02g1937 400 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 310 386 IPR036837 -
Cam02g1937 400 NCBIfam cation diffusion facilitator family transporter 110 386 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam02g1937 400 Gene3D Cation efflux protein transmembrane domain 109 305 IPR027469 -
Cam02g1937 400 FunFam Metal tolerance protein 11 112 305 - -
Cam02g1937 400 Gene3D Cation efflux protein, cytoplasmic domain 312 387 IPR036837 -
Cam02g1937 400 Pfam Cation efflux family 115 305 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam02g1937 400 SUPERFAMILY Cation efflux protein transmembrane domain-like 109 307 IPR027469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1402 Cam-Chr2:26715204 Cam02g1937 Cam-Chr2:32476223 2.10E-119 dispersed
Cam02g1937 Cam-Chr2:32476223 Cam03g1422 Cam-Chr3:28936300 2.00E-96 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1937 - - - 0.0