Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1939 ATGCAGCACCTTCAATCCCGCCTACTAAAGTCTCTTTCTATTTCTTCTTCACCGGCCGCCTCCACAATCCAAGAAATTGCTTCTGCTTCCCCCAAAGTAGGTTTGGCTAAGGTTGTGCTGAAAAAGGGGAAGGCACAGCTTTTTAAAGATGGGAGTCCAATGGTGTACAGTGGAGCTGTTGATAGAATTATTGGAAGGCCACCACCAAAAACTGGAGATGTCGTTCTGGTAGCCGATGGGACTGAAAAACCTATAGGTTGGGGTTTGTATAATTCAGTTTCTATGTTCTCTGTCAGATTGATGCAGTTGGAAGAAGAGGCAGCTAGAGACTCTTCTTGCACATTGAATATGGAGAAGATGATTGGAACAAGGATACATACTGCTAGAGAACTACGAAAGAACTTGGGACTTCCGTCGACCAGTACGAATGCTTATCGTCTTGTTAATAGTGAAGGAGATAGATTGTCAGGACTAATCATCGATGTCTTTGGAGATTTAGCAGTGGTAGCATCATCAGCTGCTTGGGTGGAGAAGTACAAAGCTGAAATAGAGGATTGTGTCCGTGGAATCGACGAAATCAATCATGTGAAATGGAGACCATCGGTGGACATTCTGAAAGAAGAAGGGATAGATGTGTCTGAATTGAAGGATACAAATCCGTCCATTTGTCCTGAAAGAACAAAGGTGACGGAGAATGAAATTTTTTATGCCATTTCACTTGAAGGCCAGAAAACAGGTTTTTATGCTGATCAGCGTGAAAATCGTCATTTTATCTCAACAATTTCGGAGGGTCAGAAGGTTCTTGATCTCTGCTGCTACAGTGGTGGGTTTTCTCTAAATGCAATACGTGGTGGAGCTATTAATGTCACGGGTATTGATTCATCATTGCCTGCTCTGGAGCTAGCAAAAGAAAATGTGATCCTTAATAGCATGGATCCGGAAAGAATATCATTTCTGAAAGCAGATGCCACTGCATTCATGAAGGATGCTCTATCTAGGAATGAATCTTGGGATATAGTCATTTTGGATCCTCCCAAACTAGCGCCACGGAAAAAGGTTCTGCAAACTGCATCAGGAATGTACAGGACTTTAAATTCATTAGCAATGCAACTCACAAGGAAAGGTGGTCTTCTCATGACTTGTTCGTGTTCTGGAGCAATGACACAAAGTGGGATGTTCTTGCAAATACTCCAGGGTGCAGCATCAATGGCCAAAAAGAAAATCACAGTTCTACGACAAGCAGGAGCGGCATGTGATCACCCGATCGACCCTACTTACCCAGAGGGTGCTTATCTTTCTAACATTCTTCTACGTGTGCTCTAA 1323 43.01 MQHLQSRLLKSLSISSSPAASTIQEIASASPKVGLAKVVLKKGKAQLFKDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDSSCTLNMEKMIGTRIHTARELRKNLGLPSTSTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYKAEIEDCVRGIDEINHVKWRPSVDILKEEGIDVSELKDTNPSICPERTKVTENEIFYAISLEGQKTGFYADQRENRHFISTISEGQKVLDLCCYSGGFSLNAIRGGAINVTGIDSSLPALELAKENVILNSMDPERISFLKADATAFMKDALSRNESWDIVILDPPKLAPRKKVLQTASGMYRTLNSLAMQLTRKGGLLMTCSCSGAMTQSGMFLQILQGAASMAKKKITVLRQAGAACDHPIDPTYPEGAYLSNILLRVL 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32483514 32487552 + CaPI482276_02g019390.1 Cam02g1939 121681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1939 440 Gene3D RNA methyltransferase domain (HRMD) like 117 220 - -
Cam02g1939 440 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 435 IPR029063 -
Cam02g1939 440 CDD AdoMet_MTases 266 381 - -
Cam02g1939 440 Pfam S-adenosylmethionine-dependent methyltransferase 225 395 IPR019614 GO:0008168(InterPro)
Cam02g1939 440 Gene3D Vaccinia Virus protein VP39 227 440 IPR029063 -
Cam02g1939 440 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 13 439 - -
Cam02g1939 440 Pfam PUA-like domain 38 101 IPR041532 GO:0003723(InterPro)
Cam02g1939 440 CDD RlmI_M_like 124 214 - -
Cam02g1939 440 ProSiteProfiles PUA domain profile. 35 91 - -
Cam02g1939 440 SMART pua_5 36 116 IPR002478 GO:0003723(InterPro)
Cam02g1939 440 CDD PUA_RlmI 36 106 IPR041532 GO:0003723(InterPro)
Cam02g1939 440 Gene3D PUA domain 35 106 IPR036974 GO:0003723(InterPro)
Cam02g1939 440 SUPERFAMILY PUA domain-like 37 105 IPR015947 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1939 - - - 0.0