Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1941 ATGACTATGACGGTCGCTGCAAGAGCAATCGCAGCAGCTCGATCAATGGCGCGATCGAGCAGTTTCCCTCTAAAATCTCCATCTTCTTATGTGTTCGCTGCGCAGAAATCTCACTCCCGCACTCTTCTCATTCGTCAGATGAGCTCGGAGGCGCAGAGCATCGCTACTCGTCTTCACAGTTCTGGATTGTTACGAAGCCAAGGCCTCATTGGAGGGAAGTGGATTGATGCTTATGATGGGAAGACCATTGAGGTTCACAATCCAGCTAATGGTGAAGTTATAACCAATGTCCCGCTCATGGGCAAAAGGGAGACCGATGATGCTATTTCTTCAGCTTATGATGCTTTTAAGTCTTGGAGCAAGCTCACTGCAGCTGATCGGAGTAATCGCTTACGCAAATGGTATGAGCTCCTACTTGCCCACAAAGAAGAGATTGGACAACTGATAACCTTAGAGCAAGGCAAACCCTTAAAGGAAGCTGTGGGTGAGACTAACTATGGAGCCAGCTTTATTGAGTTCTATTCCGAGGAAGCAAAACGGATATATGGTGACATAATTTCACCAACTATAGCCGATCGTCGAATTTTGGTCTTGAAGCAGCCAGTTGGAGTTGTTGGTGTTGTTACCCCTTGGAACTTTCCGTTGGCTATGATTACGCGGAAGGTTGGACCTGCTCTTGCATGTGGTTGTACGGTGGTCATAAAACCCTCTGAGCTTACCCCCTTGACAGCTTTAGCAGCAGCCGAGCTCTCACTTCAAGCTGGAATTCCCCCAGGTGTTGTGAATGTGGTTATGGGAGATGCTCCTGCTATTGGCGATGCTATACTCGCAAGTTCTCAGGTAAGAAAGATCACGTTTACTGGCTCAACAGCAGTTGGAAAAAAGTTGATGGCAGGAGCTGCTGGAACTGTTAAAAGGGTGTCCTTTGAACTTGGTGGTAATGCCCCTTGCATAGTATTTGATGACGCAGATGTGGATGTTGCAGTAAAAGGAGCTGATTATGGCTTTGAAACAATCCTGCTCAACATGATTAATGTAATTAGCACTTACCATGATGCATCAATATCTACTTGTAAGTGCATACTACCTAGGGATGTGGGTCTATTCAACCACGACTCTTTCCTGCAATTGCAGCAAAGTTCCGAAATAGTGGACAGACTTGTGTTTGTGCCAATAGAATTCTTGTTCAAGAAGGTATTAACAGATGTATACTTCAGTTCTGAAGGATGCTTCTTTTGCTCGTTTAAAAGATGGCTTACTGATATTGGAATCTACGAGAAATTTACAAATGCTTTCTCAAAAGCTGTGCAAAATCTGCAAGTTGGTGATGGGTTTGGTGAAGGTGTAGCTCAGGGTCCTTTAATTAATGAAGCCGCCGTGCAGAAGGTTGAGAAATTTCTTCAAGATGCCACTACAAAGGGAGCAAAAGTTCTTCTTGGTGGTAAAAGACACAGCCTTGGGATGACATTTTTTGAGCCTACAGTTATTGCTGACGTGAATAGTGACATGCTTGTATCCAGGGAGGAAGTATTTGGTCCCGTGGCACCCTTACTGCAATTCAGAACAGAGGAGGAAGCAATTGCTCTCGCTAATGACACCAATGCAGGATTAGCTGCTTACATATTCACAAATAATATTCAACGTTCATGGAGAGTGACTGAAGCTCTTGAATACGGAATGGTTGGTGTTAATGAAGGCCTAATTTCTACAGAGGTGGCTCCATTTGGTGGCGTTAAGGAGTCAGGCCTTGGAAGGGAAGGGTCGAAATATGGGATGGACGAGTATCTTGAGCTGAAATATGTTTGCTTGGGGAATATGGACCGCCATTGA 1830 44.86 MTMTVAARAIAAARSMARSSSFPLKSPSSYVFAAQKSHSRTLLIRQMSSEAQSIATRLHSSGLLRSQGLIGGKWIDAYDGKTIEVHNPANGEVITNVPLMGKRETDDAISSAYDAFKSWSKLTAADRSNRLRKWYELLLAHKEEIGQLITLEQGKPLKEAVGETNYGASFIEFYSEEAKRIYGDIISPTIADRRILVLKQPVGVVGVVTPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGDAPAIGDAILASSQVRKITFTGSTAVGKKLMAGAAGTVKRVSFELGGNAPCIVFDDADVDVAVKGADYGFETILLNMINVISTYHDASISTCKCILPRDVGLFNHDSFLQLQQSSEIVDRLVFVPIEFLFKKVLTDVYFSSEGCFFCSFKRWLTDIGIYEKFTNAFSKAVQNLQVGDGFGEGVAQGPLINEAAVQKVEKFLQDATTKGAKVLLGGKRHSLGMTFFEPTVIADVNSDMLVSREEVFGPVAPLLQFRTEEEAIALANDTNAGLAAYIFTNNIQRSWRVTEALEYGMVGVNEGLISTEVAPFGGVKESGLGREGSKYGMDEYLELKYVCLGNMDRH 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32500975 32512102 + CaPI482276_02g019410.1 Cam02g1941 121683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1941 609 CDD ALDH_F5_SSADH_GabD 85 603 - -
Cam02g1941 609 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 606 IPR050740 GO:0004777(PANTHER)|GO:0006807(PANTHER)|GO:0009450(PANTHER)
Cam02g1941 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 57 349 IPR016162 GO:0016491(InterPro)
Cam02g1941 609 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 383 607 IPR016163 GO:0016620(InterPro)
Cam02g1941 609 Pfam Aldehyde dehydrogenase family 405 601 IPR015590 GO:0016491(InterPro)
Cam02g1941 609 Pfam Aldehyde dehydrogenase family 74 332 IPR015590 GO:0016491(InterPro)
Cam02g1941 609 SUPERFAMILY ALDH-like 104 605 IPR016161 GO:0016491(InterPro)
Cam02g1941 609 FunFam Aldehyde dehydrogenase, putative 573 599 - -
Cam02g1941 609 FunFam Succinate-semialdehyde dehydrogenase I 393 570 - -
Cam02g1941 609 FunFam Succinate-semialdehyde dehydrogenase I 80 337 - -
Cam02g1941 609 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 309 316 IPR029510 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1941 Cam-Chr2:32500975 Cam06g1838 Cam-Chr6:29414919 3.30E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1941 - - - 0.0