Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1946 ATGCTTCTGCTTTTTAAACCCAACCCAACTCGTTTGCTAAGCGGAGCAACGACGGCGAAAAAAGGTGGCAAAAGGGCTGCTGTCGGAAAAGAACCGTCGCTTAAGAAGATTGACAACAGTAGCAGCGGCGGCGGTGGTGGCGGCAGCAGCCGTGGACAGTCCTTGAGGCGGCTGGAGAAAAAGGTCACCGCAGCCTTGAAAAGAGAAGGATTGGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAGTGGACAGATATGTCGAATCAAATCAATCGCACTGCTCTGTCGATCATCGGGAAAACTCTGGCTCCCTTCGACGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGCGACGGGCCAACTTCTCACGGTCCTGTGGTTGAAGCTGCAATGGATATTGTGGAGAAGAGTGGTGGACAATTTCATATTCTGCTCATTGTTGCAGATGGACAGGTAAAAGACTTTATTTGTGCCAAGGTTACTCGAAGCTCCAATATTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAAAACAATCAAAGCAATTGTCAATGCGAGTGCATATCCTCTTTCGATTATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGAAATGAAGAAGTTCAACGACAAGATCCCAGCTCGGGATTTCGATAATTTTCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAGCCACGGCACGCCTGAAAAAGAAGCAGCTTTTGCTTTAGCTGCACTTATGGAGGTTCCTTTCCAGTACAAAACAGTAACAGAAATGGGTCTTATAGGACATGTGACAGGAAAAACAAAACGCATTGTGCCACGACCCCCTCCAACACGTTATACTCGTCCTACACGGCTCACTCCCATACCTAGCAACACCTCCTCAGCTTCTGCGTCTGATGAACAGAATCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTTGGATGCGGCCACATGTTGAGAGATTGA 1002 47.8 MLLLFKPNPTRLLSGATTAKKGGKRAAVGKEPSLKKIDNSSSGGGGGGSSRGQSLRRLEKKVTAALKREGLESSNLIVGIDFTKSNEWTDMSNQINRTALSIIGKTLAPFDEDGLIPCFGFGDGPTSHGPVVEAAMDIVEKSGGQFHILLIVADGQVKDFICAKVTRSSNIGDGELSVQEEKTIKAIVNASAYPLSIILVGVGDGPWDEMKKFNDKIPARDFDNFQFVNFTEIMSKSHGTPEKEAAFALAALMEVPFQYKTVTEMGLIGHVTGKTKRIVPRPPPTRYTRPTRLTPIPSNTSSASASDEQNQVCPICLTAGKDLAFGCGHMLRD 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32562279 32570660 - CaPI482276_02g019460.1 Cam02g1946 121688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1946 333 MobiDBLite consensus disorder prediction 278 307 - -
Cam02g1946 333 PANTHER COPINE FAMILY PROTEIN 1 60 123 IPR052079 GO:0004842(PANTHER)|GO:0005634(PANTHER)|GO:0016567(PANTHER)
Cam02g1946 333 MobiDBLite consensus disorder prediction 35 49 - -
Cam02g1946 333 MobiDBLite consensus disorder prediction 13 56 - -
Cam02g1946 333 Pfam Copine 124 268 IPR010734 -
Cam02g1946 333 MobiDBLite consensus disorder prediction 291 307 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1946 Cam-Chr2:32562279 Cam09g1991 Cam-Chr9:34542363 6.10E-75 dispersed
Cam02g1946 Cam-Chr2:32562279 Cam05g2801 Cam-Chr5:35149567 2.90E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1946 K16280 - csv:101218058 410.609