Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g1998 ATGGCTACCGAGGCGACCGAAGCCACGACCAAGTTCCAGAGTCCGGATTTTCGTCCGGTACCGTCGCCTCCTGATTTCCATCCCGAGATTATGGTCTCAGCTCATGATGGTCTTCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGGTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCACTTGGTTCATGTCCAATTAAATCTGTTGGAGTTCGACAAGCCCTTAGGTCAATTTTGAAATCAGAGGGACCGGCTGGGTTTTATCGTGGTATTGGTGCTATGGGTCTTGGAGCTGGACCTGCACATGCCGTATATTTTACTGTCTACGAGAATTGTAAGAAGTTTTTCTCCGGTGGGGATCCTAATAATTCTATTGCTCACGCTGCTTCTGGCGTCTGTGCAACGGTGGCGAGTGACGCTGTGTTTACACCGATGGATATGGTTAAACAGAGGCTGCAGCTGAGTAATAATTCCTACAAGGGAGTTTTGGATTGTATCAAAAGGGTCCTTAGAGAGGAGGGTGTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTGATGAATGCTCCATTTACTGCTGTGCATTTTGCTACTTATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGTAAATGATGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTCAGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGTGATAGATTCAAAAGCGGGTCAATCAGGGACGTAATTCGGACAATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCGGCTGCAGCTATATGCTGGTCGACATATGAAGCGTTAAAGTCTTTCTTCCACGAGCTCAATGGCAGTGGCAGCGACAACTTGACATGA 996 47.19 MATEATEATTKFQSPDFRPVPSPPDFHPEIMVSAHDGLRFWQFMIAGSIAGSVEHMGMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSIAHAASGVCATVASDAVFTPMDMVKQRLQLSNNSYKGVLDCIKRVLREEGVKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESVNDEQWIVHATAGAAAGASAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVIRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFHELNGSGSDNLT 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 33038550 33041988 - CaPI482276_02g019980.1 Cam02g1998 121740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g1998 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 228 318 IPR018108 -
Cam02g1998 331 Gene3D Mitochondrial carrier domain 167 331 IPR023395 -
Cam02g1998 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 125 IPR018108 -
Cam02g1998 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 216 IPR018108 -
Cam02g1998 331 PANTHER MITOFERRIN-1-RELATED 33 321 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Cam02g1998 331 Pfam Mitochondrial carrier protein 228 321 IPR018108 -
Cam02g1998 331 Pfam Mitochondrial carrier protein 38 128 IPR018108 -
Cam02g1998 331 Pfam Mitochondrial carrier protein 132 219 IPR018108 -
Cam02g1998 331 Gene3D Mitochondrial carrier domain 24 166 IPR023395 -
Cam02g1998 331 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085(InterPro)
Cam02g1998 331 PRINTS Mitochondrial carrier protein signature 147 165 IPR002067 GO:0055085(InterPro)
Cam02g1998 331 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085(InterPro)
Cam02g1998 331 PRINTS Mitochondrial carrier protein signature 237 259 IPR002067 GO:0055085(InterPro)
Cam02g1998 331 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085(InterPro)
Cam02g1998 331 SUPERFAMILY Mitochondrial carrier 36 314 IPR023395 -
Cam02g1998 331 FunFam Mitochondrial RNA-splicing protein MRS3 167 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1998 Cam-Chr2:33038550 Cam04g0686 Cam-Chr4:21157919 1.70E-122 dispersed
Cam02g1998 Cam-Chr2:33038550 Cam08g1174 Cam-Chr8:18069576 1.10E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g1998 K15113 - csv:101215924 637.876