Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g2077 | ATGGCCACCACCATTTCTCTCTGCATTGCTTCTCTTCTCTCATTTTCCCTCCTTGTCCAAGCCAGAATTCCCGGAGTTTACTCCGGCGGCCCATGGCAGAGCGCCCACGCCACTTTCTACGGTGGCGCCGACGCTTCCGGCACCATGGGTGGAGCTTGTGGGTACGGGAATTTGTACAGCCAAGGTTATGGCGTGAACACGGCGGCCCTGAGTACCGCATTGTTCAATAAGGGTCAGAGCTGCGGCGCTTGCTTTGAAATTAAGTGCGCTAATGACCCTAGATGGTGCCATTCTGGTAGTCCCTCCATCTTGGTTACTGCTACCAATTTCTGCCCGCCCAACTATGCTCTTCCTAACGATAATGGAGGCTGGTGTAACCCTCCCCGGACTCACTTCGATCTTGCCATGCCTATGTTCCTTAAAATCGCTGAGTACCGCGCCGGAATCGTCCCCGTCTCTTACCGCCGTGTACCATGCCGGAAGCAAGGAGGAATCAGGTTCACGATCAACGGGTTCCGTTACTTCAATTTGGTTCTAATCACCAACGTGGCAGGTGCAGGGGATATCGTGAGGGTTAGCGTCAAAGGAACAAGAACCGGGTGGATGAGCTTAACAAGAAACTGGGGGCAAAATTGGCAATCCAATGCCGTCTTAGTGGGCCAGGCTCTTTCTTTTAGAGTTACCGGCAGTGACCGACGAACCTCAACGTCATGGAACATAGTCCCCGCTCATTGGCAGTTCGGCCAAACTTTCACCGGCAAGAACTTCCGTGTTTAA | 777 | 53.15 | MATTISLCIASLLSFSLLVQARIPGVYSGGPWQSAHATFYGGADASGTMGGACGYGNLYSQGYGVNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILVTATNFCPPNYALPNDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIVPAHWQFGQTFTGKNFRV | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 33675434 | 33677159 | + | CaPI482276_02g020770.1 | Cam02g2077 | 121819 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g2077 | 258 | PANTHER | EXPANSIN-A15 | 10 | 256 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | CDD | DPBB_EXPA_N | 31 | 159 | - | - | |
Cam02g2077 | 258 | Gene3D | - | 164 | 256 | IPR036749 | - | |
Cam02g2077 | 258 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 174 | 253 | IPR007117 | - | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 163 | 175 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 239 | 255 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 175 | 196 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 62 | 76 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 89 | 100 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 122 | 139 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 103 | 113 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 210 | 231 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin signature | 139 | 152 | IPR002963 | GO:0009664(InterPro) | |
Cam02g2077 | 258 | Pfam | Expansin C-terminal domain | 165 | 242 | IPR007117 | - | |
Cam02g2077 | 258 | Gene3D | - | 20 | 160 | IPR036908 | - | |
Cam02g2077 | 258 | SUPERFAMILY | PHL pollen allergen | 161 | 253 | IPR036749 | - | |
Cam02g2077 | 258 | FunFam | Expansin | 21 | 160 | - | - | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 239 | 253 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 201 | 215 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 49 | 67 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 31 | 46 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 71 | 89 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | PRINTS | Expansin/Lol pI family signature | 147 | 163 | IPR007118 | GO:0005576(InterPro) | |
Cam02g2077 | 258 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 50 | 164 | IPR007112 | - | |
Cam02g2077 | 258 | Pfam | Lytic transglycolase | 67 | 154 | IPR009009 | - | |
Cam02g2077 | 258 | FunFam | Expansin | 164 | 256 | - | - | |
Cam02g2077 | 258 | SMART | dpbb_1 | 67 | 154 | IPR007112 | - | |
Cam02g2077 | 258 | SUPERFAMILY | Barwin-like endoglucanases | 31 | 182 | IPR036908 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0866 | Cam-Chr1:10047756 | Cam02g2077 | Cam-Chr2:33675434 | 1.90E-74 | dispersed | |
Cam02g0338 | Cam-Chr2:4137936 | Cam02g2077 | Cam-Chr2:33675434 | 2.30E-73 | dispersed | |
Cam02g2077 | Cam-Chr2:33675434 | Cam05g2614 | Cam-Chr5:33721645 | 6.90E-103 | dispersed | |
Cam02g2077 | Cam-Chr2:33675434 | Cam03g0142 | Cam-Chr3:2342561 | 1.10E-137 | wgd | |
Cam02g2077 | Cam-Chr2:33675434 | Cam04g0911 | Cam-Chr4:23247577 | 2.50E-137 | wgd | |
Cam02g2077 | Cam-Chr2:33675434 | Cam07g0331 | Cam-Chr7:4460313 | 2.40E-135 | wgd | |
Cam02g2077 | Cam-Chr2:33675434 | Cam09g2011 | Cam-Chr9:34743180 | 4.20E-124 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g2077 | - | - | - | 0.0 |