Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2197 ATGCGCTTTAACCAAACTCCCTTTGTCAAGAAATCGACAAGTAACATTCTCGAGCCGCGCAATCTGAGACAGAGTATTATTTTACTGGTCCCTTTCGGATTCGCAAATGGGTCACTTTCAGAGTGGTGGTCGATGGGCTCTGTTCTGTTCTGTTTTCAGCCTGATTCCAATTCTGAATATATCCGAACCTTTAGCGGTCTCTGTCCACCACAATTCCCTTTCTGTCATTCGGCGTTCTCAATCCACTGTTTTGATTATCTGGATAAAATGAAGCACCAAGTGGCAACCACCTTCATTTCTTTAATGATTTTTATCTTGATGCAACAAGTCATTTGTGCTGATACTTCTGATACTTCTACCCCTGGCAACTGGACGTGTAAATGTTTTTCTCCATACCAAGAAAATCAGAGATTAACACTTGGGGTAAATTGTTCTACATCGTGTTCATGTTCACAAGATGTTGGGGGAATCGGACTGTGGACATGCATCTGTTCAACTGATGGCTTCCCAAAAGTTGTAGCCGAACACCGTGATTCTAACTGTTTTACGTCATGCAACTGTTCTTATGGACTGCTTCCGGAGTCACCATCTTCAAAAAGGCACATTTCAAGCAACGTGGTTGTGATTATTCTCTCACTATGTGTAATAATCATAACATTAGCCTTCTTCATCTTAGTGGTTTGCTATCTTTGTCAAAGGGGCAAGTACCGTGTTCGAACTCCAATATTTTCATTAGATAAGCAAATGAGCTACAACAGTTTGACCAACCTAATTAGTCACAAGAGTTCTTCAACACTGGATAGTAAGGTTATGATGGATTCCCCTGTGAATAACATCAAAGGATGCTTTTTCATGAATCAATGCTTGTTGAGGACTAAATCTTGGAGTATGTGTGGGATCATCATCCAATTCTCATATTCAGAGTTGGAAAATGCAACAAATAAGTTTTCAAGCTCCCATCTTGTGGGACGTGGGGGAAGTAGCTTTGTTTATCGTGGTGAATTGAAGGACGGTAGAACAGTGGCTGTAAAGCGGCTTAATATTCAAGGAGGACTGGATGTGGACTACTTATTCTTAACAGAAATACAATTGTTATCAAGACTTCATCATTGCCACGTGGTTCCTCTACTTGGTTATTGCACAGAATCAAGGGGGAAACATACTGAAAGGCTTTTGGTATATGAATACATGCCAAAGGGTAATCTAAGAGACTGTTTGGATGAAGCTTCAGAGGAGAAAATGGATTGGGGTACTCGTGTTACAATTGCTTTGGGAGCTGCAAGAGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCCAGAATTTTGCATAGAGATGTCAAGTCAACAAATATTCTTTTGGATAAAGATTGGAGAGCAAAAATAACAGACCTTGGTATGGCTACAAGGTTAAGAGGTGATGATCATCCTAGCTGTTCCAGTTCTCCTGCTAGAATGCAGGGGACTTTTGGGTACTTTGCACCGGAGTATGCAATTGTTGGAAGAGCCTCTTTGAAGTCTGATGTCTTTAGTTTTGGAGTTGTTCTTCTTGAGCTTATAACGGGTCAGCATCCCATCCATAAATCAGCAAGCAAAGGGGAGGAAAGCCTTGCAATATGGGCTGCTCCCCGGTTGCAAAATAGTAGGCTAGTCATAACAGAGTTGCCCGACCCAAATTTAGATGGAATGTTCCCGGAGGAAGAGATGCAAATAATGGCTTATTTAGCAAAGGAGTGCTTGCTGTTGGATCCTGATGCTAGACCTACCATGACTGAAGTTGTTCAAGTTCTTTCAAATATAACCCCAGATAAATCAAGAAGGAATAACATTTCTGCAAATGTTTTTCAGGAGAGGCTGTCAGCCTGTAGTGTGGAGAGTGAACCAGACATGGTAAATGACAACATGAATCCTATGGGGAAACAAGTCCATACAGAGGTGATTCCCATCGATGATGTGATGGCAAGGCAAGCTTCATCCCGCAAATGGCTTGATCGCTATTCACTACCATTGGATATTGATCGTTCACTTTGTACTGGCAACTATGACAACCAAGATATTGTTTCTTTTGAGCACATGGAAAGACGTGTACCCTTGGCTTTAAAGGGCCGCAATCTCCAAGTCCAAGCCCCAGATGATGAAACAGTAGACTTGACTGAGCCTCGGTTCGAGTCATTCTGCATCGTGAATGTCAGATCATCTTCATAG 2202 41.96 MRFNQTPFVKKSTSNILEPRNLRQSIILLVPFGFANGSLSEWWSMGSVLFCFQPDSNSEYIRTFSGLCPPQFPFCHSAFSIHCFDYLDKMKHQVATTFISLMIFILMQQVICADTSDTSTPGNWTCKCFSPYQENQRLTLGVNCSTSCSCSQDVGGIGLWTCICSTDGFPKVVAEHRDSNCFTSCNCSYGLLPESPSSKRHISSNVVVIILSLCVIIITLAFFILVVCYLCQRGKYRVRTPIFSLDKQMSYNSLTNLISHKSSSTLDSKVMMDSPVNNIKGCFFMNQCLLRTKSWSMCGIIIQFSYSELENATNKFSSSHLVGRGGSSFVYRGELKDGRTVAVKRLNIQGGLDVDYLFLTEIQLLSRLHHCHVVPLLGYCTESRGKHTERLLVYEYMPKGNLRDCLDEASEEKMDWGTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKDWRAKITDLGMATRLRGDDHPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELITGQHPIHKSASKGEESLAIWAAPRLQNSRLVITELPDPNLDGMFPEEEMQIMAYLAKECLLLDPDARPTMTEVVQVLSNITPDKSRRNNISANVFQERLSACSVESEPDMVNDNMNPMGKQVHTEVIPIDDVMARQASSRKWLDRYSLPLDIDRSLCTGNYDNQDIVSFEHMERRVPLALKGRNLQVQAPDDETVDLTEPRFESFCIVNVRSSS 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34720442 34727692 - CaPI482276_02g021970.1 Cam02g2197 121939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2197 733 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524(InterPro)
Cam02g2197 733 ProSiteProfiles Protein kinase domain profile. 316 599 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2197 733 Gene3D Transferase(Phosphotransferase) domain 1 397 622 - -
Cam02g2197 733 CDD STKc_IRAK 322 599 - -
Cam02g2197 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g2197 733 PANTHER OS01G0750732 PROTEIN 161 611 IPR050885 -
Cam02g2197 733 Pfam Protein kinase domain 318 594 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2197 733 FunFam receptor-like serine/threonine-protein kinase NCRK 291 396 - -
Cam02g2197 733 Gene3D Phosphorylase Kinase; domain 1 291 396 - -
Cam02g2197 733 SUPERFAMILY Protein kinase-like (PK-like) 296 596 IPR011009 -
Cam02g2197 733 FunFam receptor-like serine/threonine-protein kinase NCRK 397 608 - -
Cam02g2197 733 SMART serkin_6 316 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2197 Cam-Chr2:34720442 Cam11g0552 Cam-Chr11:6992725 6.60E-66 dispersed
Cam02g2197 Cam-Chr2:34720442 Cam02g2204 Cam-Chr2:34784319 7.80E-19 proximal
Cam02g2197 Cam-Chr2:34720442 Cam03g0216 Cam-Chr3:3148710 1.40E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85002 PF00069 Pkinase 1.30E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2197 - - - 0.0