Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2199 ATGAAACCCAACACTTGCAATACCAATGGCCACGTCTCCGCCGTGGATGGTCTCTGCTTGAACGATCCATTGTACTGGGGCACCGCCGCCGAGGGGCTCAAGGGAAGCCACCTCGACGAGGTGAAGAAAATGGTGGGGGAGTACCGGCGAGGGGTGGTGCGGCTCGGTGGAGAGAGCTTGACGATTGGGCAGGTGGCGGCGGTGGCGTTGCACGACGGCGGAGTGAAGGTGGAACTGAATGAGGCGGCGAGAGAGGGAGTGAAGGCGAGTAGTGATTGGGTAATGGAGAGTATGAACAAAGGGACGGATAGTTATGGAGTCACCACTGGATTTGGTGCGACCTCCCATAGGAGAACCAATCAAGGAGCTGCTCTGCAGAAGGAGCTTATTCGGTTCTTGAACGCTGGAATATTTGGAAATGGAACAGAGTCTAATCACACGCTGCCTCACATTGCCACAAGAGCAGCCATGTTGGTCAGAATCAACACTCTTCTCCAAGGTTACTCTGGCATTAGATTTGAGATTTTGGAGTCAATTACGAAGCTTCTTAACCACAATGTTACACCTTGCCTTCCCTTACGAGGCACCATTACGGCTTCTGGTGATTTGGTTCCCTTTTCCTATATTGCTGGCTTTTTGACTGGTCGTCCCAATGCCAAGGCTGTCGGCCCAACTGGCAATCTCCTCGATGCTGGAGCAGCTTTTAAACTCGCTGGCATTGATGGTGGATTCTTCGAACTACAACCTAAAGAGGGTCTTGCACTTGTCAATGGGACGGGTGTTGGATCTGGTTTGGCATCTATTGTTTTGTTTGAGGCCAATATATTGGCTCTTTTGTCTGAGGTCATTTCGGCAATTTTTGCTGAAGTAATGCAAGGAAAACCTGAGTTTACTGATCACTTGACTCATAAATTGAAACATCATCCGGGTCAAATCGAGGCAGCAGCCATAATGGAGCATCTTTTGGATGGGAGTGCTTTCATAAAAGATGCTAAGAAGTTACACGAGTTGGATCCTCTTCAAAAGCCAAAACAAGACCGTTATGCTCTTCGGACTTCACCTCAATGGCTAGGCCCTCAAATTGAAGTGATTCGGCATTCGACGAAATCAATTGAGAGAGAGATCAACTCGGTGAATGACAATCCATTGATTGATGTTTCGAGGAATAAAGCTCTACATGGAGGGAATTTTCAAGGAACTCCGATTGGGGTGTCCATGGATAATACTAGATTGGCGCTTGCCTCCATTGGAAAGCTTTTGTTTGCTCAATTCTCTGAACTTGTGAATGATTTCTATAACAATGGATTGCCCTCAAACCTCTCAGGAGGAAGTAATCCAAGCTTGGATTATGGATTTAAAGGGGCTGAAATTGCCATGGCTTCTTATTGTTCAGAACTACAATACCTGGCGAACCCAGTCACCAATCACGTTCAAAGCGCCGAGCAACACAACCAAGATGTGAACTCATTGGGTTTAATCTCTTCCCGAAAAACAGCTGAGGCAATAGATATCTTGAAGCTGATGAGCACAACTTTCCTAGTTGCTCTCTGCCAAGCCATAGATTTGAGACACATAGAGGAGAATCTGAGGAGCACTGTGAAGAACACAGTGAGTCAAGTGGCCAAGAAGGTTTTAACTATTGGAGTTAATGGGGAGCTTCATCCTTCAAGATTCTGTGAGAAAGATTTGCTGAAAGTCATTGATAGAGAATATGTTTTTGCTTACATTGACGATCCTTGCAGCATGACATATCCTTTAATGCAGAAGCTAAGGCAAGTTCTTGTGGAACATGCATTGAACAACAATGACGATTTGAAGAATTCAAACTCCTCAATCTTTCTAAAGATTGGAGCTTTTGAAGAGGAACTAAAAACCCTTTTGCCCAAAGAAGTAGAAAGTGGAAGACAAGCCATTGCAAAAGGCAAACCAACAATTCCCAACAAGATCAAGGATTGCAGATCATACCCACTTTACAGATTTGTTAGAGAAGAATTGGGAACTGCTATCTTGACAGGTGAAAAAGTGAAATCTCCTGGTGAAGAATTTGACAAAGTTTTTACTGCAATTTGTGAGGGGAAAATCATTGATCCTTTGCTTGAATGTCTTGAGAGTTGGAATGGGACTCCTCTTCCTATAAATTAA 2142 44.86 MKPNTCNTNGHVSAVDGLCLNDPLYWGTAAEGLKGSHLDEVKKMVGEYRRGVVRLGGESLTIGQVAAVALHDGGVKVELNEAAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTNQGAALQKELIRFLNAGIFGNGTESNHTLPHIATRAAMLVRINTLLQGYSGIRFEILESITKLLNHNVTPCLPLRGTITASGDLVPFSYIAGFLTGRPNAKAVGPTGNLLDAGAAFKLAGIDGGFFELQPKEGLALVNGTGVGSGLASIVLFEANILALLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHLLDGSAFIKDAKKLHELDPLQKPKQDRYALRTSPQWLGPQIEVIRHSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSGGSNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSTTFLVALCQAIDLRHIEENLRSTVKNTVSQVAKKVLTIGVNGELHPSRFCEKDLLKVIDREYVFAYIDDPCSMTYPLMQKLRQVLVEHALNNNDDLKNSNSSIFLKIGAFEEELKTLLPKEVESGRQAIAKGKPTIPNKIKDCRSYPLYRFVREELGTAILTGEKVKSPGEEFDKVFTAICEGKIIDPLLECLESWNGTPLPIN 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34758319 34762628 + CaPI482276_02g021990.1 Cam02g2199 121941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2199 713 CDD PAL-HAL 58 523 IPR001106 -
Cam02g2199 713 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Cam02g2199 713 PANTHER HISTIDINE AMMONIA-LYASE 18 712 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cam02g2199 713 FunFam Phenylalanine ammonia-lyase 14 259 - -
Cam02g2199 713 FunFam Phenylalanine ammonia-lyase 260 558 - -
Cam02g2199 713 FunFam Phenylalanine ammonia-lyase 526 647 - -
Cam02g2199 713 NCBIfam phenylalanine ammonia-lyase 22 703 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cam02g2199 713 Gene3D - 526 647 IPR023144 -
Cam02g2199 713 Gene3D - 14 259 IPR024083 -
Cam02g2199 713 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824(InterPro)
Cam02g2199 713 Pfam Aromatic amino acid lyase 60 536 IPR001106 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2199 Cam-Chr2:34758319 Cam04g0809 Cam-Chr4:22376029 0.00E+00 dispersed
Cam02g2199 Cam-Chr2:34758319 Cam08g1206 Cam-Chr8:18417301 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2199 K10775 - csv:101218156 1357.43