Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2273 ATGAACTGGAGTCCTAGCAGAATCTTGATGTTTCGTTTGGAAGTTCCTGGAAGATTGCTGGTGGGTTCAACTCAGCAAATGAGTATGGTTGAATACAGCTTCAGAGGATATCTGGCGCAGCTTTTGATATCCGCATTGTACCTTAGAAATGATTCCTTGGAAATGGAAGAATTTGATTCTGAGAAAGCTGGGACGAGTTACGCGCTAGATGTAGGAAAAAGGTTTTCTATAGAGGATGACATTAATCGTCTGTTTCAAGCAATTGATATCAGAACCTTACGTAAGAGGTCAAGTCAGCAACGTGAAGTTGATAAAGATGCTCTGCGGAAGAGTGCGATGAAAAGACCAGTTAGAGTAGGTTCATCTCACATGGCAGGGATTGGAATTTCTGAACCTGCAAGTTTAAAGCAGGCGTTGAGGGGCTTATGCATATCCCAGGCTGCAGAAATGGCTGCTTCAAAAAGGTTAACAAGGTCTGTAGGTTCACCCAGAATCTCCGAAGCAGGAACTATCAAAAGATTGTATAGGGCGGTGGTGGTTGAGGCCAGTGGATCTGGTGTGCCTGTAAATGAAAGCAAAGCAAATTTGGTAGAAATTTCCATCGTTTCAGAAAGAATTATGTCAACTTTTCAAAATAAGATGCCCGAATTGCCTCATAAAACTGAGGCTGATATACCAAACCAAGGAGCTGAGTCTTCTTCTTCCAAGGATACTGGGGTATCAGAAAAGGCGGGTGTGGATAGATTGATGTCAAAGGATCTTGTTTTTAATACGGCTACTGAGGTGACAAGTATAAAGCCACCTGGTGAGGTGGGAAAACTTAAATCTCCTTCCCTTACTCCTTCTGGTGAGAAGGATCCGGCTGTGAACGGTATGGCTATTTCCTCAACTGAAGATTTGACAAAAAATTCAGTGCCAGAGAAGGAGAGAGGTACAATGGATTGTTTATCTTCTCTATCAAGCTCTGGATCTGTTGTCAGGCCGAACAAATCAGCTTTCAATAATACACGCTTCATCAAACCTATTTTCAGGACCAAGAATTTTGTCAAGAAGAAAGCAAAACTTGAACCAAATTCCTCCCCTAGTATGTCCGATGTCTGCACAGTAACGTTTGACACTGATTTGGCTACCATAGCAGAAAAGTCTGAGAACCAGATGCCAGATAACGCACAGCTTCATGAGATTAAAGAAGATAAATGTTCTTCTGTCTCTAGTAACATAACTTTAGGTGTTGAAGTAAGTGGAAATGTAGGAAACACAGAATCTAGTAGACCTGGTACGTCTCTCAGCTGCTGTAACAGGAACAGACCAACTATTATGCTATCTGATGAGAGATCCAGATCAAGAGAGAAAGGGATGTTCTCTCAGAGCTCTAAAAGTAGTGTTGGTGAATGTAGCAGTAGCCCAAGCATCAGTGGGGAAAGCATTCTCAGTGGATCAAGTCGCAGTGGAGTTCGGCCTCACATGTCAAAAGACTTGAAATGGGAGGCTATCCACCACCTCAAGGATCAACATAAATGCCTAGGTCTGAGAAACTTCAAGCTGCTAAAGAGACTTGGTCTCGGGGACATTGGGACTGTCTATCTCTCTGAGCTTTGCGATTCAAGCTGTCTTTTTGCTATGAAAGTGATGGACAAGGAGTTCTTGGCAAGTAGGAAAAAAATAATTCGGGCACAAACTGAGAGAGAGATACTACAAATGCTTGACCATCCATTTCTCCCTACATTATATGCCCATTTCGAGACGGATAAGCACTCATGCCTGGTCATGGACTACTGTCCCGGTGGAGATCTCCACGTACTGCGACAGAAGCAACCATGCAAGAGTTTCTCTGAGCGTGCAGTCAGGTTCTATGTCGCTGAAGTTCTTCTTGCACTGGAGTACTTGCACATGCTAGGAGTTGTTTATCGCGACCTGAAACCCGAAAACGTCCTGGTCCGAGAAGATGGGCACATCATGCTCACGGACTTTGATTTGTCCCTTAGATGTGCTGTTAACCCAACGCTGCTTCAATCATCATCTCCAGTTGTGGAACCCACTAAGAGGACGTTGAATCCCTGTGATGAATCTAGTTGCATTGACCCTTTCTGCCTCCATCCATCCTGGCAGGTCTCATGCTTCACTCCCAAAGTTCTATCTTCTCCATACAAATCCCGGAGAACGAAAACAGATCATCAGGCTAGTCTATTACCACAGCTTATAGTCGAACCAACTGGTGCACGGTCCAATTCGTTTGTAGGAACCCATGAATACCTCGCTCCTGAGATTGTCAAGGGTGACGGCCATGGGAGCGCTGTTGATTGGTGGACTTATGGGATTTTCCTGTTTGAGCTACTATATGGTAAGACTCCCTTCAAAGGTTCAGGAAACGAGGACACATTAGCGAACATAGTATCCCAAACTCTCAAGTTCCCCGATTGCCCCATAGTTAGTTTTCATGCAAGAGACCTGATCAGATGTCTGCTGACAAAGGAGCCCGAGAACCGATTAGGCTCGACAAAAGGAGCTATCGAGATTAAGCAGCATCCATTTTTTGAAGGCCTCAATTGGGCTCTAATACGTTGTGCAACACCACCCGAGCTTCCCAAGTTTTTCGACGGTGGAACTAGTGCAATGCCAGTGGATTCTGGGGAGAATACAAAGCGTAGAGATCTCGAAAATATGGAAGCGGATGCAGCAATGTTTGACCTGTTTTAG 2697 44.42 MNWSPSRILMFRLEVPGRLLVGSTQQMSMVEYSFRGYLAQLLISALYLRNDSLEMEEFDSEKAGTSYALDVGKRFSIEDDINRLFQAIDIRTLRKRSSQQREVDKDALRKSAMKRPVRVGSSHMAGIGISEPASLKQALRGLCISQAAEMAASKRLTRSVGSPRISEAGTIKRLYRAVVVEASGSGVPVNESKANLVEISIVSERIMSTFQNKMPELPHKTEADIPNQGAESSSSKDTGVSEKAGVDRLMSKDLVFNTATEVTSIKPPGEVGKLKSPSLTPSGEKDPAVNGMAISSTEDLTKNSVPEKERGTMDCLSSLSSSGSVVRPNKSAFNNTRFIKPIFRTKNFVKKKAKLEPNSSPSMSDVCTVTFDTDLATIAEKSENQMPDNAQLHEIKEDKCSSVSSNITLGVEVSGNVGNTESSRPGTSLSCCNRNRPTIMLSDERSRSREKGMFSQSSKSSVGECSSSPSISGESILSGSSRSGVRPHMSKDLKWEAIHHLKDQHKCLGLRNFKLLKRLGLGDIGTVYLSELCDSSCLFAMKVMDKEFLASRKKIIRAQTEREILQMLDHPFLPTLYAHFETDKHSCLVMDYCPGGDLHVLRQKQPCKSFSERAVRFYVAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLTDFDLSLRCAVNPTLLQSSSPVVEPTKRTLNPCDESSCIDPFCLHPSWQVSCFTPKVLSSPYKSRRTKTDHQASLLPQLIVEPTGARSNSFVGTHEYLAPEIVKGDGHGSAVDWWTYGIFLFELLYGKTPFKGSGNEDTLANIVSQTLKFPDCPIVSFHARDLIRCLLTKEPENRLGSTKGAIEIKQHPFFEGLNWALIRCATPPELPKFFDGGTSAMPVDSGENTKRRDLENMEADAAMFDLF 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35358595 35361857 - CaPI482276_02g022730.1 Cam02g2273 122015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2273 898 MobiDBLite consensus disorder prediction 267 290 - -
Cam02g2273 898 PANTHER FLIPPASE KINASE 1-RELATED 385 869 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam02g2273 898 SUPERFAMILY Protein kinase-like (PK-like) 488 864 IPR011009 -
Cam02g2273 898 FunFam serine/threonine-protein kinase D6PK-like 740 863 - -
Cam02g2273 898 Pfam Protein kinase domain 742 845 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2273 898 Pfam Protein kinase domain 514 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2273 898 Gene3D Phosphorylase Kinase; domain 1 511 592 - -
Cam02g2273 898 ProSiteProfiles Protein kinase domain profile. 513 845 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2273 898 FunFam Serine/threonine-protein kinase D6PK-like 511 596 - -
Cam02g2273 898 SMART serkin_6 513 845 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2273 898 MobiDBLite consensus disorder prediction 219 243 - -
Cam02g2273 898 Gene3D Transferase(Phosphotransferase) domain 1 593 661 - -
Cam02g2273 898 Gene3D Transferase(Phosphotransferase) domain 1 740 862 - -
Cam02g2273 898 MobiDBLite consensus disorder prediction 453 485 - -
Cam02g2273 898 MobiDBLite consensus disorder prediction 226 240 - -
Cam02g2273 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g2273 898 FunFam serine/threonine-protein kinase D6PK-like 597 664 - -
Cam02g2273 898 CDD STKc_phototropin_like 513 863 - -
Cam02g2273 898 MobiDBLite consensus disorder prediction 444 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1161 Cam-Chr1:18174418 Cam02g2273 Cam-Chr2:35358595 6.60E-152 dispersed
Cam02g2140 Cam-Chr2:34164485 Cam02g2273 Cam-Chr2:35358595 5.30E-98 dispersed
Cam02g2273 Cam-Chr2:35358595 Cam05g0015 Cam-Chr5:621851 1.30E-148 dispersed
Cam02g2273 Cam-Chr2:35358595 Cam02g2274 Cam-Chr2:35375172 9.50E-115 tandem
Cam02g2412 Cam-Chr2:36601438 Cam02g2273 Cam-Chr2:35358595 2.70E-64 transposed
Cam03g0805 Cam-Chr3:9223956 Cam02g2273 Cam-Chr2:35358595 7.30E-103 transposed
Cam07g1086 Cam-Chr7:25316578 Cam02g2273 Cam-Chr2:35358595 5.00E-91 transposed
Cam02g2273 Cam-Chr2:35358595 Cam04g1010 Cam-Chr4:24292220 3.40E-197 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85005 PF00069 Pkinase 1.30E-36 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2273 - - - 0.0