Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2274 ATGGAGTCATCTCCCGACGACATCGCCGACGACCTACAAAGCCTCAGCTTCAACTCTACCAACACCAACCGCAGCACAAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTAACATCCCTTCCATTCTCAGCAAGCCCCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCTTCGTCTCGTCAACTCGTCTTCTCCGACCTTAAGTTCTTCCACCGTCTTGGCTCTGGCGACATTGGCTCCGTCTACCTCTCCGGCCTCAAGTCCGCTGGAACCGACGGATGTTTGTTTGCAGCGAAGGTAATGGATAAGAAGGAACTAGCGAGTAGGAGTAAAGAAGGCAGAGCAAGGACTGAGAGAGAGATTTTGGAGTCTTTGGACCATCCGTTTCTACCGACGCTCTATGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTGACGGAGTTCTGTCCCGGCGGCGACCTACACGTTCTCCGGCAACGGCAACCTAACAAACGCTTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTACCTTCACATGATGGGGATTGTTTACCGTGATCTGAAGCCGGAAAATGTACTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCCTTGAAGTGTGAGGATTCGACGGCGACCCCACAGTTTATCAATGCTAAATATCTGACAAACGGCACCGCCCCGCTAAAGGACTACCAAATTGATGCCCCTCCTTTCACATCATCCTCCTGCATTCTTCCAAACTGTATAGTCCCGGCCGTGTCATGTTTCAACCCAAAACGCAAGCGCAAGAAGAAGTCTGGTCACCGTAACGGACCCGAGTTTGTCGCTGAACCGGTTGACGTCCGGTCAATGTCATTTGTTGGCACCCACGAGTACTTGGCCCCGGAGATCGTCTCTGGTGAGGGCCATGGAAGCGCGGTGGACTGGTGGACTCTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCTTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCTAGAGCTCTTGAGTTCCCTAAAGAACCAGCGGTGCCAACGGCAGCGAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGGCGAGACGGTTGGGATCGACGACAGGGTCGTCGGCAATCAAGCACCATTCATTTTTTCAAGGAGTAAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCTCCACCTTTTAGTAGAGAAAAAATTGCATCGGATGAAAGCTGCACAGAGGCTCCAGTGGAAAGCCGCCTCTTTCCTGTGCTTCCCATGGTACACTGTCATCCGTTCCCTGCCTTGGTGTCATCAGAGATGTACGGAAGGCATACATCTGATCAAGTTGAGGGCTTGCCACGGCAAAGTAGCTGGCAATGGCTGATAGGTCATGGATGA 1494 52.14 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSFNIPSILSKPHAPSSDPCWSAVNRIRSESSSRQLVFSDLKFFHRLGSGDIGSVYLSGLKSAGTDGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQFINAKYLTNGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSREKIASDESCTEAPVESRLFPVLPMVHCHPFPALVSSEMYGRHTSDQVEGLPRQSSWQWLIGHG 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35375172 35379924 + CaPI482276_02g022740.1 Cam02g2274 122016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2274 497 MobiDBLite consensus disorder prediction 1 34 - -
Cam02g2274 497 PANTHER FLIPPASE KINASE 1-RELATED 24 433 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam02g2274 497 FunFam serine/threonine-protein kinase D6PK-like 307 430 - -
Cam02g2274 497 FunFam serine/threonine-protein kinase D6PK-like 166 233 - -
Cam02g2274 497 Gene3D Transferase(Phosphotransferase) domain 1 308 430 - -
Cam02g2274 497 SUPERFAMILY Protein kinase-like (PK-like) 57 441 IPR011009 -
Cam02g2274 497 SMART serkin_6 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2274 497 Gene3D Transferase(Phosphotransferase) domain 1 166 243 - -
Cam02g2274 497 Gene3D Phosphorylase Kinase; domain 1 77 165 - -
Cam02g2274 497 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2274 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam02g2274 497 MobiDBLite consensus disorder prediction 9 34 - -
Cam02g2274 497 Pfam Protein kinase domain 309 412 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2274 497 Pfam Protein kinase domain 82 242 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam02g2274 497 FunFam serine/threonine-protein kinase D6PKL2 78 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2274 Cam-Chr2:35375172 Cam05g0015 Cam-Chr5:621851 4.40E-114 dispersed
Cam02g2273 Cam-Chr2:35358595 Cam02g2274 Cam-Chr2:35375172 9.50E-115 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85006 PF00069 Pkinase 1.90E-34 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2274 K08286 - csv:101207262 867.07