Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2295 ATGGCGGAAGAACATAGATGCCAAGCGCCGAAACTTTGCGTTAATAACTGTGGATTCTTCGGGAGTCCGGCGACTCAAGATCTCTGTTCAAAATGTTACCGAGATCTGCAGTTAAAGGAACAACAATCCTCCTCCGCTAAACTCGCCTTAAACCAAACCCTAACATCCGCCGCCTCATCGTCCTTCGCGGATGCGGTGTTGTTAAATCCGAAACCGGCTTCATCGGAAGCGAACCAACCTCTGGCGGAGACGAGGACGGAAGTGGTTCCGACGCCGGCGGCAACACAGCAGCAGCCGAGCCGATGTACGACGTGCAGGCGGCGCGTGGGGTTGACGGGGTTCAAGTGCAGGTGCGGGATGGTGTACTGTGGGACTCACCGGTACCCGGAGCAACACGGTTGCGAATTTGACTTCAAGCGAATGGGGAAGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATCTGA 486 55.56 MAEEHRCQAPKLCVNNCGFFGSPATQDLCSKCYRDLQLKEQQSSSAKLALNQTLTSAASSSFADAVLLNPKPASSEANQPLAETRTEVVPTPAATQQQPSRCTTCRRRVGLTGFKCRCGMVYCGTHRYPEQHGCEFDFKRMGKEQIAKANPVVKGEKLQKI 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35548226 35548711 - CaPI482276_02g022950.1 Cam02g2295 122037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2295 161 PANTHER AN1-TYPE ZINC FINGER PROTEIN 8 161 IPR050652 -
Cam02g2295 161 Pfam AN1-like Zinc finger 102 138 IPR000058 GO:0008270(InterPro)
Cam02g2295 161 FunFam Zinc finger AN1-type containing 6 74 157 - -
Cam02g2295 161 SUPERFAMILY AN1-like Zinc finger 88 156 IPR035896 -
Cam02g2295 161 Gene3D - 73 157 IPR035896 -
Cam02g2295 161 SMART AN1_Zf_4 102 139 IPR000058 GO:0008270(InterPro)
Cam02g2295 161 Pfam A20-like zinc finger 12 34 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cam02g2295 161 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Cam02g2295 161 MobiDBLite consensus disorder prediction 71 93 - -
Cam02g2295 161 SMART A20_3 10 34 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cam02g2295 161 Gene3D - 1 61 - -
Cam02g2295 161 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677(InterPro)|GO:0008270(InterPro)
Cam02g2295 161 MobiDBLite consensus disorder prediction 72 93 - -
Cam02g2295 161 ProSiteProfiles Zinc finger AN1-type profile. 96 142 IPR000058 GO:0008270(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2295 Cam-Chr2:35548226 Cam04g1022 Cam-Chr4:24391323 2.10E-41 dispersed
Cam02g2295 Cam-Chr2:35548226 Cam01g0350 Cam-Chr1:3878766 5.10E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2295 - - - 0.0