Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2334 ATGATGGAAGGTATGGTTCTCAAGCTTCCATCCTTCCATTCCCAATTCCAATTCATAAACCCTAGTCGTTGCATTTCCTCTTTCTCCTCCACTCTTCCTACTTCCTCTTCTCCTTTTCTCCGATTCCGCAACCGCCGATTTTCTTCTCCCTTCTCAGTATCTGCTTCTGCTTCCACCTCCAGGGAAACCGACAGCTTGCATCTTAACTCTCTTTCGCTTGGCCACACAACCCGTCCTGATTTCCCCATCCTCCATCAGGAAGTAAATGGCTCCAAGCTTGTCTACTTGGACAACGCTGCCACCTCTCAGAAACCTATTGCTGTGTTGAAAGCTTTGCAGAATTATTATGAGTCTTACAATTCAAATGTTCATCGTGGCATACACTCCTTGAGTGCGAAAGCAACTGACGAGTATGAGCGGGCAAGAAAGAAAGTTGCGTCTTTTATCAATGCTGGAGAAGCTAAAGAGATTGTTTTTACCAGGAATGCAACTGAAGCTATCAATTTAGTGGCTTATTCTTGGGGCCTAGCAAATTTAAAATCAGGAGATGAGATCATACTTACGGTTGCTGAACATCATAGTGCCATTGTACCTTGGCAACTTGTAGCTGAAAGGACTGGTGCTATTCTGAAGTTTGTGAGTTTAGGTGAACATGATGTTCCAAACTTAAAAGACTTAAAGGAGATGTTTTCAACAAAAACGAAGCTTGTGGTTACCCATCATGTATCAAATGTACTAGCATCTGTTCTTCCAATAGAAGAAATAGTTGGCTTGGCACATCGTTTTGGGGCAAAGGTGCTAGTAGATGCATGCCAGAGTGTTCCACATATGGTTGTTGACGTCCAGGTGCTTGATGCTGACTTTCTTGTTGCTTCTTCTCACAAGATGTGTGGGCCTACAGGCATCGGATTTTTGTATGGAAAGATTGATCTGCTGTCTGCAATGCCTCCATTCTTAGGTGGTGGAGAGATGATCTCAGATGTATTTCTTGACCATTCCACATTTGCACAACCTCCTTCCAGATTTGAGGCTGGGACACCAGCAATCGGAGAAGCAATTGGATTGGGAGCTGCTATTGATTATTTGTCCGGAATTGGAATGCAAAAGATTCATAGTTATGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTCCCTAACATTCGGATATATGGCCCAGCTCCCACCGCACATGTTCAACGTGCTGCTCTGTGTTCTTTCAACATTGGAGACACTCATCCAACCGACATAGCAACCTTTCTCGATCAACAGCATGGTGTAGCCATTAGATCGGGACATCACTGTGCGCAGCCCCTCCATCGGGCTCTTGGTGTCAGCTCAAGCGCACGAGTTAGCCTTTACTTCTACAACACAAAAGAGGATGTGGACTACTTTATCCAGGCTCTAAACGACACGCCTCCGGGGAAGCTTCTACTTGAATCATCCATGGATTTTGATCGAACTCAAATCGAAAACGAAAGGAGAAACTTACATGGAGAAAGATTTGGCCAAAACGCAGCTCCTCAATCAAGAATCGCAAGAGTAATATCTCGATCATTGTTCTTCGCTGTGATTCTCTTCTTAATTCCTCACATTGGTCCCATATTCAACGACCAAGGAAAATTCCTCTCCTTCGATTCCACAAACCCTAACTCCATAACGAAACAAGAATTCTATGACTTAATCGACGAATTGAAAACCGCCGAAATTCTCACAAAGGAGAAAAAGAGCCTTGTGTTGATTGCAGGATCGAATTCAATCAACGAAGCCCCGAATCACTATGCAGATTACCTGAGAAGTATGGGAGCCGATGTAGTAATAGAGAACAATTTTTTGTTTGGAGGCTCCTTTAAGAACGAATCGTTTGATATTGTGTTCACGCTAGGGCAATTCGGAGCCGGATTTGTTGACCGTGTTCTTAAAAGCGGCGGCGCAGTGGTTGTTCCGGCGAAGGATATGTCTCTAAATGTGTATCTTGATGAGTTGAATTATACGTGCGTTTATTTAAAGCCATACAGTCTTGAATCGATCATCATGGTGGTGGTGAAACCAACGCCGTCTGATCAATCAGATGCCGGAGTTTTCGGCAGTAAGGAAGAACTAATGGCGGCTCGGGCTGTTGTTCCTCAGCGACAACTTAGAATCAGAGATGAAGGTAAGCCGAAGGTCGTAGCGGTGGAAGGAAGAACAAGACGAATTCTTAAGGATATAGGAAATCTAGTGCCTGATCGAGCCATAGAAGGGAAACCCGGAACTCAACCAGCAGAGAAGAATAAGAAGGCAATCACCCAAAAGGTGGATGGAGGAGTTGGGAAGGGAGTCAATGCAACGAAGGCTGGAGTAACTGAGAAACCGAAACTGAAGACTGTAATCCGCTCCAGCGACGAGAGATATATAAGCAACGTCAAAGATACTAAATCAAAGGACAAGAATAAGAGATCTCTGAGTTCAACCCTTAGTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAACAAACCACTGGATTCTTCAGTAGCTAATATTGATGAAGCAGATGCCAACAATGAATTAGCCGTAGTAGAATACATTGATGACATGTATAAGTTTTACAAGCTTGCAGAAGATGAGAGTAGAGTATCAGATTACATGGGAGCACAGCCAGATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCGAAAGTTTGAACTGATGCCGGAAACCCTTTACCTCACTGTAAACATCGTCGACCGATTCCTTTCCTTAAAGACTGTACCTAGAAAGGAACTTCAATTGCTTGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTAAGTATATCTGCAAATACTTATCAAAGAGAACAAATTTTGGTGATGGAGAAAGTAATCTTGGGTAGGTTGGAATGGCTTTTAACAGTTCCTACCCCTTATGTTTTTCTTGTTCGGTATGTCAAGGCTTCTGAGCCATCTGATGATGAGATGGAGAATATGGTATTTTTTCTAGCTGAGCTTGGTCTGATGAACTATCCAATAGCAATATCATACAGCCCTTCAATGATTGCTTCAGCGGCTGTTTATGCTGCAAGATGCACACTTGAAAAGAGCCCAATCTGGACAGCAACTTTGCATCACCACACAGGCTATGTTGAAGAAGAGTTGAAGGAATGTGCAAAACTCCTTCTGAACTTACACCGTGGAGCTGTAGATTCAAAACTCAGGGCTGTATACAGAAAATATTCAAGTCCCGATCGCCGTGCCGTTTCTCTTCTTCCTCCAGCTAAAAGCTTAACTCCAGATTGTAATCCAGAAATCTCCGATGCTTTAAGTGGAGATGTTGGTTGCTAG 3387 43.34 MMEGMVLKLPSFHSQFQFINPSRCISSFSSTLPTSSSPFLRFRNRRFSSPFSVSASASTSRETDSLHLNSLSLGHTTRPDFPILHQEVNGSKLVYLDNAATSQKPIAVLKALQNYYESYNSNVHRGIHSLSAKATDEYERARKKVASFINAGEAKEIVFTRNATEAINLVAYSWGLANLKSGDEIILTVAEHHSAIVPWQLVAERTGAILKFVSLGEHDVPNLKDLKEMFSTKTKLVVTHHVSNVLASVLPIEEIVGLAHRFGAKVLVDACQSVPHMVVDVQVLDADFLVASSHKMCGPTGIGFLYGKIDLLSAMPPFLGGGEMISDVFLDHSTFAQPPSRFEAGTPAIGEAIGLGAAIDYLSGIGMQKIHSYEEELANYLYENLRAVPNIRIYGPAPTAHVQRAALCSFNIGDTHPTDIATFLDQQHGVAIRSGHHCAQPLHRALGVSSSARVSLYFYNTKEDVDYFIQALNDTPPGKLLLESSMDFDRTQIENERRNLHGERFGQNAAPQSRIARVISRSLFFAVILFLIPHIGPIFNDQGKFLSFDSTNPNSITKQEFYDLIDELKTAEILTKEKKSLVLIAGSNSINEAPNHYADYLRSMGADVVIENNFLFGGSFKNESFDIVFTLGQFGAGFVDRVLKSGGAVVVPAKDMSLNVYLDELNYTCVYLKPYSLESIIMVVVKPTPSDQSDAGVFGSKEELMAARAVVPQRQLRIRDEGKPKVVAVEGRTRRILKDIGNLVPDRAIEGKPGTQPAEKNKKAITQKVDGGVGKGVNATKAGVTEKPKLKTVIRSSDERYISNVKDTKSKDKNKRSLSSTLSARSKAACGLTNKPLDSSVANIDEADANNELAVVEYIDDMYKFYKLAEDESRVSDYMGAQPDLNAKMRSILIDWLIEVHRKFELMPETLYLTVNIVDRFLSLKTVPRKELQLLGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDDEMENMVFFLAELGLMNYPIAISYSPSMIASAAVYAARCTLEKSPIWTATLHHHTGYVEEELKECAKLLLNLHRGAVDSKLRAVYRKYSSPDRRAVSLLPPAKSLTPDCNPEISDALSGDVGC 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35930908 35941688 + CaPI482276_02g023340.1 Cam02g2334 122076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2334 1128 CDD SufS_like 94 472 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
Cam02g2334 1128 FunFam G2/mitotic-specific cyclin-1 983 1102 - -
Cam02g2334 1128 ProSitePatterns Cyclins signature. 890 921 IPR048258 -
Cam02g2334 1128 SMART cyclin_7 992 1076 IPR013763 -
Cam02g2334 1128 SMART cyclin_7 895 979 IPR013763 -
Cam02g2334 1128 FunFam G2/mitotic-specific cyclin 874 982 - -
Cam02g2334 1128 SMART Cyclin_C_2 988 1107 IPR004367 -
Cam02g2334 1128 Pfam Cyclin, C-terminal domain 988 1106 IPR004367 -
Cam02g2334 1128 MobiDBLite consensus disorder prediction 747 769 - -
Cam02g2334 1128 CDD CYCLIN_AtCycB-like_rpt2 988 1106 - -
Cam02g2334 1128 Gene3D Aspartate Aminotransferase, domain 1 78 472 IPR015422 -
Cam02g2334 1128 Pfam Cyclin, N-terminal domain 861 985 IPR006671 -
Cam02g2334 1128 Gene3D - 105 365 IPR015421 -
Cam02g2334 1128 SUPERFAMILY Cyclin-like 989 1110 IPR036915 -
Cam02g2334 1128 SUPERFAMILY PLP-dependent transferases 77 474 IPR015424 -
Cam02g2334 1128 CDD CYCLIN_AtCycB-like_rpt1 839 983 - -
Cam02g2334 1128 SUPERFAMILY Cyclin-like 850 983 IPR036915 -
Cam02g2334 1128 Pfam Aminotransferase class-V 94 468 IPR000192 -
Cam02g2334 1128 Gene3D - 861 1103 - -
Cam02g2334 1128 Gene3D - 875 986 - -
Cam02g2334 1128 NCBIfam SufS family cysteine desulfurase 77 474 IPR010970 GO:0006534(InterPro)|GO:0030170(InterPro)|GO:0031071(InterPro)
Cam02g2334 1128 PANTHER CYSTEINE DESULFURASE 61 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2334 Cam-Chr2:35930908 Cam04g0578 Cam-Chr4:19471980 2.10E-111 dispersed
Cam02g2334 Cam-Chr2:35930908 Cam05g2238 Cam-Chr5:30609286 1.20E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2334 K11717 - csv:101222630 853.588