Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2342 ATGGAACAAACAAAGTACAGAGCCGATCTTCTTTCATCCCTCTTCCTTGTCCTCATCCTTTTCCTCTCCCTTTCCGGCCGATCCGCCGTTCATGCCTACAAGAACTACACCGTCGGAGATTCCGTCGGTTGGTTCGACAAATTGGAGAAACCTGCCGTCGATTACCAAGAATGGACCGCTGGCAAGACCTTCGGCCTCGGCGATTTTCTAATTTTTAACACGGACAACAATCACTCGGTTGTGCAAACATACAATTTCACCACATACAGGCTTTGTGACTACGACGACGCATCGGAAAACGACACGATGGAATGGTCTGCCGCTGACCCGTCGGCGACCACTCCCTACGCCGTTACCGTGGCTGTCCCATTGGTGAAAGAAGGGACCAACTATTTCTTCTCTGGCAACTACGACGGAGAGCAATGCCAAAATGGCCAACAATTCAAAATAAACGTCACCCATGGACAAGGCCTCCCAAAAAGCATGAGAGATTCTTCCGACGAAGCTCCGGCTCCAGTAGTTCCCGACACCGGTGACCAAACCGAAGCTGCACCCGACACCATTGTCCCTTCCAGCTTCGACAATCCTCGAAACGACGTCGCTGATAGCGACAAGGAAGCTTCAGGCTCCGACTCGTTATCGCTTTGCATCAAGTTTAATGAGCTCTTCTTCTTGTTAGCTGGTATTGTTTCTGCCTGCTTTTTTCTTTGTACTGAGTGA 720 50.14 MEQTKYRADLLSSLFLVLILFLSLSGRSAVHAYKNYTVGDSVGWFDKLEKPAVDYQEWTAGKTFGLGDFLIFNTDNNHSVVQTYNFTTYRLCDYDDASENDTMEWSAADPSATTPYAVTVAVPLVKEGTNYFFSGNYDGEQCQNGQQFKINVTHGQGLPKSMRDSSDEAPAPVVPDTGDQTEAAPDTIVPSSFDNPRNDVADSDKEASGSDSLSLCIKFNELFFLLAGIVSACFFLCTE 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 35977131 35981330 + CaPI482276_02g023420.1 Cam02g2342 122084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2342 239 ProSiteProfiles Phytocyanin domain profile. 34 154 IPR003245 GO:0009055(InterPro)
Cam02g2342 239 Gene3D - 33 157 IPR008972 -
Cam02g2342 239 SUPERFAMILY Cupredoxins 34 152 IPR008972 -
Cam02g2342 239 FunFam Early nodulin-like protein 18 33 155 - -
Cam02g2342 239 Pfam Plastocyanin-like domain 46 146 IPR003245 GO:0009055(InterPro)
Cam02g2342 239 PANTHER BLUE COPPER PROTEIN 18 166 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cam02g2342 239 MobiDBLite consensus disorder prediction 156 210 - -
Cam02g2342 239 CDD Phytocyanin 34 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2342 Cam-Chr2:35977131 Cam06g0199 Cam-Chr6:3811698 5.40E-33 dispersed
Cam02g2342 Cam-Chr2:35977131 Cam08g1587 Cam-Chr8:22028961 1.50E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2342 - - - 0.0