Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam02g2442 | ATGCGGTCTCACGACCTTTACAAAGACTTTCCGCTTCCGGTGCTTTTCCGGCCACCGTTTCTTGCTCGTCCGAGATACTCTCCGCATAGATGTTTTTTAGTTTTCGTTTTGAAGAAAGCCACAGGCACCAAGCAATGGATAAGGGCATGCGAAAAACACTTGATTGGGATCATCACCGTCCAACTAACAAAGAGAGCAAGCCGAAGGCATGACATGGTTGGATGGAAGCATCCTTTGAATAACATCAGAAGTAGACTATCGTTTGGCAGAATCCACAAGAGGATATTGATTCTCTTTGGACTTTTGGACATCCATAAAGCTGCAGAAAGCTCCTTATGCAAAGGGGAAGAAGAAGGTGCTAGTTCAATTGATGGGAAATGCACTCCCAAATGTGCTGATTACCAAATTGTTCTGCTTCTTTTAATCGTGTCTGAAGTTATTTCCATATTTTCGCATTTACCCATGGGAGAAGACGATGAACAGGATAGACAGAAGATCACAAATCTTCATCTAAGATCGGAAATGATTACTATGGGCCATCCACAGATGGCAAACCAGCCTCATGTAATCAATCAGTCCCAAGTTATGAACCAGCCTCAGTCTCAAGTTATGAACCAGCCACAGGTGATTAATCAACCTCAATTTCTGAACCAAGGCCAGCTAATGAACCATTCTCAGATAATGTCTCAGTCACAGGCCATCAACCAGCCAAATCTTCTGCCGCAACCTCAGGCCATGCAGCAGTCCCAGATGATCATGAGTCACTCTCTGCCGCCTATGATGAGTGGCAACTATAAGGTATGGGCACATCCGCAAGCCCCTTTGGATCCTAACAAGAAGTACCGCAACTTCCCGAAGCCTAACTATGGAAATATGAAACAGTCAAGATCGGGGCGAGGAAATTGGAAGGGAAAAGGCGTTAGTGACAAAAGGATAAACAATAGGAGAATGGAAAAACCTTTACCGGGTTCCATAAGTGGTCCAAATAGTGCTGTAGGGTATCAACCTCCAAGTCTTCATGAGCTGCAGTCTCAAAATCGTTTAAGGGCTCGTAAGTTTTACTCTAAAAAGAAGTTTGGTAATAGATTTGCACCTTATGCGCCTCGTAATACCACGTCTTTTATAATTCGTGCAAAGAAGTCTGGTGGGATCGCTTCGCTTGTGTCCCCTAGTCCCGTAACACCCGCTGTGCTTCCTACTCCAATGTTTTCCCCTTCAAGGGAGGCGTTGGGTGATATGGCCAAGGAGGAATGGGGTGTTGATGGTTATGGATCAATGAAAGGGTTGATAAGGCTTCGAGGGTCTGAGAATAAGGCAGAAGTGCAGGATGAGGAAGAAGAGGAAGTTGGTGGTGGTTCGAGTGATAGTGATGTAGAGGAACATCTGGAGGTAGAACGCAGATTGGACCATGATTTGAGCCGATTTGAAATGATATATCAGAACTATGGAGTAGAGTATAATAACTGTTTGGAAAATAGGGTCGATGATCAAGATAGCCATATAGCTCAGTTGGAGGAGGAGAACTTGACACTGAAGGAGAAACTTTTTCTTATGGAGAGAGAGCTTGTTGACTTGAGGAGGAAGTTGCAACTTCTCGAGGGGCAAAACCCAGCTATTGAAGATGTGAATGAGGAGGTAGTGGAGAACGTATCTGAGAATGAGAGTGATGGAGGGTTGGAGATGGAGTATGTATCTGAAATTAGACAAAACCAAGATGTTGATGTTGATTCTAAGGAGGAAGATGAAGAAGTCTTAGAGATTGAGGGTGGGGAAGAATGTGTAGGGGAAGATTTCAAGAGAGAGAAAGTGAATGAAAAGAAATACATAGTGAATGATGAAACCGTGAAGGAATCAGATGAACAGATTCCGGAAGACGGTGTGGCAAAAGATGATGAATCAAAGGGTGAACTTATTTCAGGGAAGGTAAATGAATGCGACAATATGGACGAAAACTTGGGTAATATTTTGCACACGGATTCAGGGATTGGAAAAGAAGCCATGGTCAATGATGAAGCCGAGCAGAATAGAGTTGTATCTGTAAAAATAGCTGTAGATGTAAAGGAAGGGTGTGAAGAAATAACGGAGGATTCTGTATCAGGAAACGACTTTAATGCAAGGCTGAGCTGCGAGTCATACGGCTCTTCTAGTAAAGATTTTGGACGTGATCATTTGCTTGCATTGGCCTTCCTACGACGTCTAGATTCTGAGATAAAAGATGCAGCAAGATTTTGCTTGCAGGATTCGTTTGCCATCTGGAAAATGAGCTGTTGCTGTCTAATGGCTGTTAGTCACTCAAGTCTTCCTCCTATCCTGTGCATGGACTTAAAGTTTGGTCTGTGCCTATTCTTTGTAGTCATGGATGAGCCTTCCATCAGTTCCACAAGCTCGCAATTAACTGTGGATTTCTATAAGAGTTCATGTCCGAATGTTCTCAGAACCGTAAGGAGAGAAGTCATGAATGCTATTAAGAATGAGATGCGAATGGCTGCTTCGCTTCTTCGCCTCCACTTTCACGACTGCTTTGTTAATGGTTGTGACGGATCCGTGCTGTTGGATGGAAGTGATGGGGAGAAATTTGCACTTCCCAACATCAATTCTCTTAGAGGGCTTGAAGTTGTGGATAGAATCAAAGCCGCACTGGAGAGTTCATGCCCCGGAGTTGTATCATGTGCTGATTTATTAACTATAGCTGCAAGAGATTCTGTCCTCTTGAGTGGAGGACCGTCATGGAAGGTTTTATTGGGGAGAAGAGATGGATTGGTAGCGAATAAAACAGGAGCTGATCAAGGACTTCCCTCTCCATTTGAAAGCGTTGATGGTATAATCAACAAGTTTGTTGATGTTGGCCTTGATATCACCGACGTCGTCGCTTTATCTGGAGCCCATACAATTGGATTTGCAAGATGTGCAATGTTCAACAATAGGCTGTTCAACTTCTCAGGAAGTGGTTCTCCAGACCCAACCATGGAGTCCGCCATGGTATCTGATCTCCAAGCTTTATGCCCTCTCACCGACGACGGCAACAAGACCACCGTTCTCGACAGAAACTCCACCGATTTATTCGACAACCATTACTTCAAAAACTTGCTCAACCGGAAGGGCCTCTTGGGCTCCGACCAAATTCTGTTCTCCGACTCCGACGATGCTGCTCAGCCTCAAACCACCACTACAAAAGCCTTGGTCCAAGCTTATAGCTCTAACACCACGCTTTTCTTCGCCGACTTTGTCAAAGCCATGATCAAGATGGGGAATATAAGTCCACTCACCGGCTCCGCCGGTCAGATCCGAAACAACTGCAGACTCCTTAATTCCTCCTAA | 3318 | 44.48 | MRSHDLYKDFPLPVLFRPPFLARPRYSPHRCFLVFVLKKATGTKQWIRACEKHLIGIITVQLTKRASRRHDMVGWKHPLNNIRSRLSFGRIHKRILILFGLLDIHKAAESSLCKGEEEGASSIDGKCTPKCADYQIVLLLLIVSEVISIFSHLPMGEDDEQDRQKITNLHLRSEMITMGHPQMANQPHVINQSQVMNQPQSQVMNQPQVINQPQFLNQGQLMNHSQIMSQSQAINQPNLLPQPQAMQQSQMIMSHSLPPMMSGNYKVWAHPQAPLDPNKKYRNFPKPNYGNMKQSRSGRGNWKGKGVSDKRINNRRMEKPLPGSISGPNSAVGYQPPSLHELQSQNRLRARKFYSKKKFGNRFAPYAPRNTTSFIIRAKKSGGIASLVSPSPVTPAVLPTPMFSPSREALGDMAKEEWGVDGYGSMKGLIRLRGSENKAEVQDEEEEEVGGGSSDSDVEEHLEVERRLDHDLSRFEMIYQNYGVEYNNCLENRVDDQDSHIAQLEEENLTLKEKLFLMERELVDLRRKLQLLEGQNPAIEDVNEEVVENVSENESDGGLEMEYVSEIRQNQDVDVDSKEEDEEVLEIEGGEECVGEDFKREKVNEKKYIVNDETVKESDEQIPEDGVAKDDESKGELISGKVNECDNMDENLGNILHTDSGIGKEAMVNDEAEQNRVVSVKIAVDVKEGCEEITEDSVSGNDFNARLSCESYGSSSKDFGRDHLLALAFLRRLDSEIKDAARFCLQDSFAIWKMSCCCLMAVSHSSLPPILCMDLKFGLCLFFVVMDEPSISSTSSQLTVDFYKSSCPNVLRTVRREVMNAIKNEMRMAASLLRLHFHDCFVNGCDGSVLLDGSDGEKFALPNINSLRGLEVVDRIKAALESSCPGVVSCADLLTIAARDSVLLSGGPSWKVLLGRRDGLVANKTGADQGLPSPFESVDGIINKFVDVGLDITDVVALSGAHTIGFARCAMFNNRLFNFSGSGSPDPTMESAMVSDLQALCPLTDDGNKTTVLDRNSTDLFDNHYFKNLLNRKGLLGSDQILFSDSDDAAQPQTTTTKALVQAYSSNTTLFFADFVKAMIKMGNISPLTGSAGQIRNNCRLLNSS | 1105 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 36883037 | 36895258 | + | CaPI482276_02g024420.1 | Cam02g2442 | 122184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam02g2442 | 1105 | PRINTS | Haem peroxidase superfamily signature | 829 | 843 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Haem peroxidase superfamily signature | 888 | 905 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Haem peroxidase superfamily signature | 954 | 969 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Haem peroxidase superfamily signature | 1014 | 1029 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Haem peroxidase superfamily signature | 906 | 918 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | MobiDBLite | consensus disorder prediction | 614 | 635 | - | - | |
| Cam02g2442 | 1105 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 954 | 964 | IPR019793 | - | |
| Cam02g2442 | 1105 | Gene3D | - | 803 | 1103 | - | - | |
| Cam02g2442 | 1105 | PANTHER | OS02G0832600 PROTEIN | 242 | 589 | - | - | |
| Cam02g2442 | 1105 | FunFam | Peroxidase | 932 | 1082 | - | - | |
| Cam02g2442 | 1105 | ProSitePatterns | Peroxidases active site signature. | 829 | 840 | IPR019794 | GO:0004601(InterPro) | |
| Cam02g2442 | 1105 | MobiDBLite | consensus disorder prediction | 434 | 461 | - | - | |
| Cam02g2442 | 1105 | SUPERFAMILY | Heme-dependent peroxidases | 797 | 1103 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | FunFam | Peroxidase | 801 | 941 | - | - | |
| Cam02g2442 | 1105 | ProSiteProfiles | Plant heme peroxidase family profile. | 797 | 1103 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 906 | 921 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 868 | 881 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 887 | 897 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 807 | 826 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 831 | 851 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 1028 | 1045 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 953 | 965 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | PRINTS | Plant peroxidase signature | 1012 | 1027 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | Pfam | Peroxidase | 814 | 1066 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cam02g2442 | 1105 | Gene3D | Peroxidase, domain 2 | 932 | 1085 | - | - | |
| Cam02g2442 | 1105 | Coils | Coil | 487 | 535 | - | - | |
| Cam02g2442 | 1105 | CDD | secretory_peroxidase | 797 | 1100 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cam02g2442 | 1105 | MobiDBLite | consensus disorder prediction | 288 | 308 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam01g1710 | Cam-Chr1:30679289 | Cam02g2442 | Cam-Chr2:36883037 | 2.90E-90 | dispersed | |
| Cam02g2442 | Cam-Chr2:36883037 | Cam03g0022 | Cam-Chr3:1238973 | 6.90E-83 | dispersed | |
| Cam02g2439 | Cam-Chr2:36868578 | Cam02g2442 | Cam-Chr2:36883037 | 8.70E-149 | proximal | |
| Cam02g2442 | Cam-Chr2:36883037 | Cam02g2443 | Cam-Chr2:36899632 | 1.20E-82 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam02g2442 | K00430 | - | csv:101211007 | 951.814 |