Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2443 ATGTCGTCCTTCAAATTTGAAGCTTTAGCAGCCTTGTTGTTGTGTATGATGTTGAGGGGATGTTGGGCCCAACTCAGCCCTACCTTCTACGACCAATCTTGCCCTAATCTAACCGCCATAGTCAGAGATGCAATAAGCCAGGCATTCCAGGGTGATGTTCGAGCCGGAGCCAAGCTCATTCGCTTTCACTTCCACGATTGCTTCGTCAATGGTTGTGATGGATCGGTTTTACTAGAGAATCAAGATGGTGTGGAAAGCGAGTTAGATGCTCCAGGGAACCAAGGAATACAAGGCTTTGACATTGTCGACAACATAAAAGCTGCAGTTGAAGCTGCCTGCCCAAACACCGTGTCTTGTGCTGACATCTTAGCCCTTTCCTCTCGTGAATCTGTCATCTTGACGGGAGGGCCAAGTTGGGTAGTTCAATTGGGAAGAAGAGATAGCAGAAACGCAAATAGAACTGGAGCTGAAAACAATCTCCCAAGCCCTTTCGAAACACTCGATCAACTTCGGGTAAAATTTAATGCAGTTGGTCTCGATTCTACCGATCTTGTGGCTTTATCTGGAGCGCATACGTTCGGAAGGTCAAGATGCGTATTCTTCAGCGGGCGGCTAAGCAATTTCAGCGGTACCGGAAGTCCAGACCCGACTCTTGACCCGACGTTACGGGATGCACTGGTCATCGCTTGTCCGACCGGGGACGGAAACAACCGCATCGCACTTGACGTGGCGACGCCGGACAGCTTCGACAATGCATACTACACCAATCTGGTCAACAACCGTGGGCTTCTCCAATCGGATCAAGAGCTGTTCTCAACCGAAGGGGCGGAAACCATCGGCACCGTGAACCGTTTTGCCGGCAACCAATCTGATTTCTTTGGTCAGTTCGGTCAGTCTATGATAAACATGGGGAACCTCCAACCATTACTTGGGCCCAATGGAGAAATCAGGTCCAATTGTAGGCGGGTTAATCCTTTGAATATTACCACTGGTGCTGCTACAGCTGTTATGTAA 1014 49.31 MSSFKFEALAALLLCMMLRGCWAQLSPTFYDQSCPNLTAIVRDAISQAFQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENQDGVESELDAPGNQGIQGFDIVDNIKAAVEAACPNTVSCADILALSSRESVILTGGPSWVVQLGRRDSRNANRTGAENNLPSPFETLDQLRVKFNAVGLDSTDLVALSGAHTFGRSRCVFFSGRLSNFSGTGSPDPTLDPTLRDALVIACPTGDGNNRIALDVATPDSFDNAYYTNLVNNRGLLQSDQELFSTEGAETIGTVNRFAGNQSDFFGQFGQSMINMGNLQPLLGPNGEIRSNCRRVNPLNITTGAATAVM 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36899632 36901012 + CaPI482276_02g024430.1 Cam02g2443 122185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2443 337 Gene3D Peroxidase, domain 2 161 303 - -
Cam02g2443 337 Pfam Peroxidase 41 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g2443 337 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 Gene3D - 29 324 - -
Cam02g2443 337 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cam02g2443 337 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 FunFam Peroxidase 28 173 - -
Cam02g2443 337 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2443 337 FunFam Peroxidase 161 303 - -
Cam02g2443 337 PANTHER PEROXIDASE 72-RELATED 14 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0491 Cam-Chr1:5181324 Cam02g2443 Cam-Chr2:36899632 5.50E-116 dispersed
Cam02g2443 Cam-Chr2:36899632 Cam02g2445 Cam-Chr2:36913835 5.90E-110 dispersed
Cam02g2442 Cam-Chr2:36883037 Cam02g2443 Cam-Chr2:36899632 1.20E-82 tandem
Cam02g2443 Cam-Chr2:36899632 Cam02g2444 Cam-Chr2:36905983 1.40E-119 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2443 K00430 - csv:101217743 588.186