Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2445 ATGGGTTCCCCTAAATTAACAGCCTTAGTTGCAGTGTTAGCTTTGATGCTGGGATCCTCTCAGGCTCAGCTTAACCCTTTCTTCTACACCTTCACATGCCCTCAGCTGCCTTTTGTTGTTCTAAATGTGGTCTCACAAGCTCTCCAAACCGATGATCGAGCAGCTGCCAAGCTCATTCGTCTTCACTTTCACGACTGCTTCGTCAATGGGTGTGACGGGTCTGTGCTACTAGAAGACGTACCGGGAGTCATCGATAGTGAATTAAACGCACCTCCCAACAACGGAATCCAAGGGCTGGACATTGTGGACAACATCAAAGCAGCAGTTGAAAGCGCTTGCCCAGGCGTTGTCTCCTGTGCTGACATCTTAGCGCTCTCAGCTCAAGTTTCTGTCGTATTGTCTGGAGGGCCAGCATGGGTTGTTCCACTGGGAAGAAAAGACAGCAGAAGAGCTAACAGAACTGCAGCCGCAAATCTTCCGAGTCCATTCGAAACTCTAGACGTGTTGAAAGCCAAATTTGCGGCACTTGGGCTGGGTTCTACAGATTTGGTGACTCTATCAGGAGCCCACACATTTGGTCGATCCAGATGCCTCTTTTTCACAGGACGGTTCGACAATTTCAATAACACTGGTCTGCCAGACCCTACTCTGGATGCTGCTTACAGGGAGCAGCTCCGTCAAGCTTGTACCACTCCTGGAACGCGAGTAAGCTTTGACCCGATCACACCAGACACCTTTGATAAAAACTACTACATCAATCTTCAAAATCACAAAGGGCTTCTCCAAAGTGATCAAGAGCTTTTCTCAACTCCCGGGGCTGATACAACTGCCATTGTCAATACATTTGCCGCTAGCCAACTTTTGTTCTTCATTCAATTTGGGAATTCCATGATCAAAATGGGAAATCTGAGCCCTCCACCTGGTATCCCATCTGAAGTCAGATTGAACTGTAGAAAGGTCAACCCACCCACTGTTCTACATGATGTTATCTAA 993 47.73 MGSPKLTALVAVLALMLGSSQAQLNPFFYTFTCPQLPFVVLNVVSQALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLEDVPGVIDSELNAPPNNGIQGLDIVDNIKAAVESACPGVVSCADILALSAQVSVVLSGGPAWVVPLGRKDSRRANRTAAANLPSPFETLDVLKAKFAALGLGSTDLVTLSGAHTFGRSRCLFFTGRFDNFNNTGLPDPTLDAAYREQLRQACTTPGTRVSFDPITPDTFDKNYYINLQNHKGLLQSDQELFSTPGADTTAIVNTFAASQLLFFIQFGNSMIKMGNLSPPPGIPSEVRLNCRKVNPPTVLHDVI 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36913835 36915087 + CaPI482276_02g024450.1 Cam02g2445 122187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2445 330 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cam02g2445 330 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 FunFam Peroxidase 27 172 - -
Cam02g2445 330 Gene3D - 28 321 - -
Cam02g2445 330 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cam02g2445 330 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 Pfam Peroxidase 41 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 Gene3D Peroxidase, domain 2 160 300 - -
Cam02g2445 330 PANTHER PEROXIDASE 72-RELATED 11 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2445 330 FunFam Peroxidase 160 300 - -
Cam02g2445 330 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2443 Cam-Chr2:36899632 Cam02g2445 Cam-Chr2:36913835 5.90E-110 dispersed
Cam02g2445 Cam-Chr2:36913835 Cam02g2449 Cam-Chr2:36945519 1.10E-113 dispersed
Cam02g2444 Cam-Chr2:36905983 Cam02g2445 Cam-Chr2:36913835 8.20E-120 tandem
Cam02g2445 Cam-Chr2:36913835 Cam02g2446 Cam-Chr2:36918026 1.10E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2445 K00430 - csv:101211752 600.127