Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2446 ATGGCTTCCCTTAAATTCCTAGCCATTGTTGTGGTGGCTGCTTTGATGCTATCACCTTCTCACGCCCAGCTTTCCCCTTTCTTCTACGCCCAATCATGCCCTAAGCTGCCTTTCCTTGTTCTCAACGTGGTTGCCCGAGCTCTACAAACCGATGATCGAGCTGCTGCCAAACTCATTCGCCTCCATTTTCATGATTGCTTCGTTAATGGGTGTGATGGATCTGTGCTATTGGTGGACGTACCGGGCATCATCGATAGTGAATTAAACGGACCTCCAAATCAAGGAATCCAAGGGATGGACATTGTGGACAACATCAAAGCAACAGTTGAAAGTGCTTGTCCAGGGGTTGTTTCCTGTGCTGACATCTTAGCCATTTCGGCTCAAATCTCGGTTTTCTTGTCGGGAGGACCAATGTGGGCAGTACCAATGGGAAGAAGAGACAGTAGGATAGCCAATAGAACTGGAACCTCAAACCTGCCGGGTCCCTCAGAAAGTCTAGACGGACTTAAAGCCAAGTTTGGGGTTCATGGGCTTGATTCAACCGATCTGGTGGCTCTATCAGGAGCCCACACGTTCGGCCGATCAAGATGCCTCTTCTTCAGTGACCGCTTCAACAACTTCAACAACACCGGCAGACCCGACCCCACACTTAACCCAGCATACAGGGAGCAGCTTCGAAGACAATGTACATCCCAACAAACACGAGTGAATTTCGATCCAATCACACCCACTAGATTCGACAAGGCCTATTACACCAATCTCGTCAGCTTGAGGGGGCTTCTCCAAAGTGACCAAGAGCTGTTCTCAACCCCCAGGGCTGATACCACGACCATCGTCAGAACTTTCGCCACCAACCAACCTGCCTTCTTTAACCAATTTGTGAAATCCATGATCAAAATGGGCAATCTCAAGCCTCCCCCTGGCATTGCTTCGGAAGTCAGATTGGATTGTAAGAGGGTCAATCGAGCCAGAGCCTACGACGTTATGTAA 990 49.39 MASLKFLAIVVVAALMLSPSHAQLSPFFYAQSCPKLPFLVLNVVARALQTDDRAAAKLIRLHFHDCFVNGCDGSVLLVDVPGIIDSELNGPPNQGIQGMDIVDNIKATVESACPGVVSCADILAISAQISVFLSGGPMWAVPMGRRDSRIANRTGTSNLPGPSESLDGLKAKFGVHGLDSTDLVALSGAHTFGRSRCLFFSDRFNNFNNTGRPDPTLNPAYREQLRRQCTSQQTRVNFDPITPTRFDKAYYTNLVSLRGLLQSDQELFSTPRADTTTIVRTFATNQPAFFNQFVKSMIKMGNLKPPPGIASEVRLDCKRVNRARAYDVM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36918026 36919290 + CaPI482276_02g024460.1 Cam02g2446 122188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2446 329 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cam02g2446 329 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 Gene3D Peroxidase, domain 2 160 300 - -
Cam02g2446 329 PANTHER PEROXIDASE 72-RELATED 9 320 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 ProSiteProfiles Plant heme peroxidase family profile. 23 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 FunFam Peroxidase 160 300 - -
Cam02g2446 329 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cam02g2446 329 Gene3D - 28 321 - -
Cam02g2446 329 FunFam Peroxidase 27 171 - -
Cam02g2446 329 Pfam Peroxidase 41 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2446 329 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2446 Cam-Chr2:36918026 Cam02g2449 Cam-Chr2:36945519 2.90E-106 dispersed
Cam02g2445 Cam-Chr2:36913835 Cam02g2446 Cam-Chr2:36918026 1.10E-137 tandem
Cam02g2446 Cam-Chr2:36918026 Cam02g2447 Cam-Chr2:36925510 7.00E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2446 K00430 - csv:101211989 571.237