Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2447 ATGGGTTCTTTCAGTTTCTTGCTTTTGTTTGTGGGTGTTTTGTTTGGAAGGTCTTATGCCCAACTCTCCGAGAACTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAGGTCAAGAGAGCTATCGAAACCGACATCCGTGCCGGTGCGAAACTCATTCGCTTCCATTTCCACGATTGCTTCGTCCAAGGTTGCGACGGCTCTGTTTTGCTAGAGGATGCTCCTGGCATAGACAGTGAGCTAAATGGACTTGGAAATTTAGGAATCCAAGGATTGGAGATTGTCGATGCTATCAAAGCCGCTGTCGAGAGGGAATGTCCCGGCATAGTCTCATGCGCCGACATCCTAGCTCAAGCCTCTAAAGACTCTGTGGACGTGCAAGGAGGGCCCAGTTGGAGAGTTTTATACGGAAGAAGAGATAGCAGAACAGCCAATAGATCAGGGGCTGATGAACTCCCAAGTCCCTTCGAAAATCTTGACCAACTCAAAAGAAAGTTCGAAGTCGTTGGGTTGAATTCCACTGATCTTGTTGCTCTATCAGGAGCACATACGTTTGGTCGGTCAAGATGCATGTTCTTCAGTGACCGTTTGTCTAACTTTAGTGGGAGTGGGCAACCAGATCCGACCCTAGATCCAACCTACAGGCAAGAACTGGAAAGAGCTTGTACAAGTCCAGAAACACGAGTGAATTTCGATCCAACAACACCAGACACATTTGACAAAAATTACTACACTAATCTTCAAGCCAATCGAGGTCTTCTTAAGAGTGACCAAATTCTGTTCTCTACTGGAGGGGCCGACACAATTGCCATTGTCAACCTTCTTGGATCGCGAGAAGGCACCTTCTTTAGACAATTTCGGCTCTCCATGATTAAGATGGGAAATATTAGACCCTTAACCGGAACCCAAGGGGAAATCAGAAGAAATTGCAGGAGGGTCAATGACTTGGGAGGTGAAGCAGGACATGATGTTATGTAA 990 46.87 MGSFSFLLLFVGVLFGRSYAQLSENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRTANRSGADELPSPFENLDQLKRKFEVVGLNSTDLVALSGAHTFGRSRCMFFSDRLSNFSGSGQPDPTLDPTYRQELERACTSPETRVNFDPTTPDTFDKNYYTNLQANRGLLKSDQILFSTGGADTIAIVNLLGSREGTFFRQFRLSMIKMGNIRPLTGTQGEIRRNCRRVNDLGGEAGHDVM 329
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 36925510 36926684 + CaPI482276_02g024470.1 Cam02g2447 122189
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2447 329 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 Gene3D - 26 318 - -
Cam02g2447 329 Gene3D Peroxidase, domain 2 157 297 - -
Cam02g2447 329 FunFam Peroxidase 157 297 - -
Cam02g2447 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Cam02g2447 329 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 ProSiteProfiles Plant heme peroxidase family profile. 21 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 CDD secretory_peroxidase 21 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g2447 329 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 Pfam Peroxidase 38 276 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 PANTHER PEROXIDASE 72-RELATED 10 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2447 329 FunFam Peroxidase 25 170 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2447 Cam-Chr2:36925510 Cam02g2449 Cam-Chr2:36945519 8.80E-143 dispersed
Cam02g2446 Cam-Chr2:36918026 Cam02g2447 Cam-Chr2:36925510 7.00E-108 tandem
Cam02g2447 Cam-Chr2:36925510 Cam02g2448 Cam-Chr2:36932197 4.90E-170 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2447 K00430 - csv:101212230 492.656