Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2448 ATGGAAGGGAATGAAAATGATATGAATCACGGACACTTGCCACAAAATATCTTCTATAGTCTATCCACTTTTTTTGGGTCTTATGCCCAACTCACCGAGAACTTCTACGACCAAACTTGCCCTCGTCTCCCTAACATTGTCCGCCGTGAGGTCAAGAGAGCTATCGAAACCGACATCCGTGCCGGGGCGAAACTCATTCGCTTCCATTTCCATGATTGCTTCGTTCAAGGTTGCGATGGCTCTGTTTTGCTAGAGGATGCTCCCGGCATAGACAGTGAGCTGAATGGACTTGGAAATTTAGGAATCCAAGGACTTGAGATTGTCGACGCCATCAAAGCCGCCGTCGAGAGGGAATGTCCTGGCATTGTCTCATGTGCGGACATCCTAGCTCAAGCATCTAAAGACTCTGTCAATTTGCAAGGAGGACCCAGTTGGAGAGTTTTATATGGAAGAAGAGATAGCAGAACCGCCAATAAAACAGGGGCTGATGAACTCCCAAGTCCCTTTGAAAATCTTGACCAACTCAAGAAAAAGTTCAAAGACGTTGACTTGGATTCCATTGATCTTGTTGCTCTATCTGGGGCACATACGTTTGGTCGGTCGAAATGCATGTTCTTCAGCGACCGTTTGTCCAACTTTAGTGGGAGTGGGCAGCCAGATCCGACCTTGGATCCAACCTATAGGCAAGAACTGAAAAAAGCTTGTACAAGTCCAGAAACACGAGTGAATTTGGATCCAACAACACCGGACACATTTGACAAAAATTACTTCACCAATCTTCAAGCCAATCGAGGTCTTCTACGGAGCGACCAAGTTCTATTCTCTACTGGAGGGGCCGACACAATTGCCATTGTCAACAATCTTGGGTCGCGAGAAGAAACTTTCTCTAGACAATTTCAGCTGTCCATGATTAAGATGGGAAATATTGAACCCTTAACTGGAACCCAAGGAGAAATTAGAAGAAACTGTAGGAGGGTGAATGACTTGGGAGATGAAGCAGGGCATGATGTTATGTAA 1017 45.62 MEGNENDMNHGHLPQNIFYSLSTFFGSYAQLTENFYDQTCPRLPNIVRREVKRAIETDIRAGAKLIRFHFHDCFVQGCDGSVLLEDAPGIDSELNGLGNLGIQGLEIVDAIKAAVERECPGIVSCADILAQASKDSVNLQGGPSWRVLYGRRDSRTANKTGADELPSPFENLDQLKKKFKDVDLDSIDLVALSGAHTFGRSKCMFFSDRLSNFSGSGQPDPTLDPTYRQELKKACTSPETRVNLDPTTPDTFDKNYFTNLQANRGLLRSDQVLFSTGGADTIAIVNNLGSREETFSRQFQLSMIKMGNIEPLTGTQGEIRRNCRRVNDLGDEAGHDVM 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36932197 36933970 + CaPI482276_02g024480.1 Cam02g2448 122190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2448 338 FunFam Peroxidase 166 306 - -
Cam02g2448 338 PANTHER PEROXIDASE 72-RELATED 21 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 Gene3D Peroxidase, domain 2 166 306 - -
Cam02g2448 338 FunFam Peroxidase 34 181 - -
Cam02g2448 338 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 Gene3D - 35 327 - -
Cam02g2448 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Cam02g2448 338 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2448 338 CDD secretory_peroxidase 30 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g2448 338 Pfam Peroxidase 47 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2448 Cam-Chr2:36932197 Cam02g2451 Cam-Chr2:36964018 1.10E-103 dispersed
Cam02g2447 Cam-Chr2:36925510 Cam02g2448 Cam-Chr2:36932197 4.90E-170 tandem
Cam02g2448 Cam-Chr2:36932197 Cam02g2449 Cam-Chr2:36945519 1.20E-134 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2448 K00430 - csv:101212230 483.796