Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2449 ATGGCCTCCGCCAATGCCGCAGCCTCCTTTTTCTTTCTGGCTCTTCTCTTCGGAGGCTCTTCAGCTCAACTCTCCGAGACCTTTTACGATCAAACCTGCCCTCGCCTCCCCAACATTGTCCGTGCCTCCGTCAAAAGAGCTATTGAAACCGACATCCGTGCCGGTGCTAAACTCATCCGCCTCCATTTTCATGACTGCTTCGTCAATGGATGTGATGGCTCTGTTTTGCTAGAAGATGCTCCTGGCATAGTCAGTGAGCTCAACTCACCTGGAAATCAAGGAATCCAAGGCCTCGAGATTGTTGACGCCATTAAAGCCGACGTTGAGAGGGAATGCCCCGGCATCGTCTCCTGTGCCGACATTCTAGCTCAAGCTTCCAAGGACTCTGTCGATGTGCAAGGAGGGCCTAGTTGGAGAGTGTTATACGGAAGACGAGACAGTAGAATAGCGAACAAAACAGGGGCGGATAGTGGGTTGGCCAGTCCCTTCGAAACTCTAGACCAACTCAAAGCTAAATTTGCTGCTGTTGGCCTTGGTACCACTGATCTCGTCGCTTTATCAGGAGCGCATACGTTTGGTCGATCGAGATGCAGATTCTTCAGCCACCGATTTGCGAATTTCAACAACACTGGAAGGCCAGACCCATCACTGGATGCTAACTACAGAGGATTCCTTGAAGGGGTTTGCTCAGCAGGTCCAGACACAAGAGCCAATTTCGACCCAGTAACACCCGACGTGTTCGACAAAAACTACTACACAAATCTTCAAGTTGGGAAGGGGCTTCTGCAAAGTGACCAAGAGCTGTTCTCTACTCCAGGGGCTGACACCATCGCCATTGTCAACAGCTTCGCAGCCAGAGAAGGCACCTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGGAACATCAAGCCTTTGACTGGTAGCCGTGGGGAAATTAGAAGAAACTGCAGGAGGGTTAACTCTGGGTTGGGTGGAGAAGGGCATGATGTTATGTAA 1002 50.9 MASANAAASFFFLALLFGGSSAQLSETFYDQTCPRLPNIVRASVKRAIETDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIVSELNSPGNQGIQGLEIVDAIKADVERECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANKTGADSGLASPFETLDQLKAKFAAVGLGTTDLVALSGAHTFGRSRCRFFSHRFANFNNTGRPDPSLDANYRGFLEGVCSAGPDTRANFDPVTPDVFDKNYYTNLQVGKGLLQSDQELFSTPGADTIAIVNSFAAREGTFFKEFRQSMINMGNIKPLTGSRGEIRRNCRRVNSGLGGEGHDVM 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 36945519 36946777 + CaPI482276_02g024490.1 Cam02g2449 122191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2449 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cam02g2449 333 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 FunFam Peroxidase 27 173 - -
Cam02g2449 333 FunFam Peroxidase 160 301 - -
Cam02g2449 333 CDD secretory_peroxidase 23 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g2449 333 SUPERFAMILY Heme-dependent peroxidases 23 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PANTHER PEROXIDASE 72-RELATED 15 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 ProSiteProfiles Plant heme peroxidase family profile. 23 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2449 333 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cam02g2449 333 Gene3D - 28 322 - -
Cam02g2449 333 Gene3D Peroxidase, domain 2 160 301 - -
Cam02g2449 333 Pfam Peroxidase 40 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2444 Cam-Chr2:36905983 Cam02g2449 Cam-Chr2:36945519 4.50E-126 dispersed
Cam02g2445 Cam-Chr2:36913835 Cam02g2449 Cam-Chr2:36945519 1.10E-113 dispersed
Cam02g2446 Cam-Chr2:36918026 Cam02g2449 Cam-Chr2:36945519 2.90E-106 dispersed
Cam02g2447 Cam-Chr2:36925510 Cam02g2449 Cam-Chr2:36945519 8.80E-143 dispersed
Cam02g2449 Cam-Chr2:36945519 Cam02g2451 Cam-Chr2:36964018 2.40E-103 dispersed
Cam02g2448 Cam-Chr2:36932197 Cam02g2449 Cam-Chr2:36945519 1.20E-134 tandem
Cam02g2449 Cam-Chr2:36945519 Cam02g2450 Cam-Chr2:36954760 1.30E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2449 K00430 - csv:101217781 595.89