Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2451 ATGGCTTCTTTTAAAGCTATTATTCCTTTGATATTGTGTGTTTGTTTGATGGTTGGCTCTGTCAGTGCTCAACTTAGCTCTACGTTTTACGATACCACATGTCCCAATGTATCAAGTGTTGTGCATGGTGTTGTGGAGCAAGCTCTTCAAAATGATGATAGAGCCGGTGCCAAACTCATTCGTCTCCATTTCCACGATTGTTTTGTCGATGGTTGTGATGGGTCAGTATTGTTAGAGGACCAAGATGGTATAGTGAGCGAGTTGGGTGCACCTGGAAACGGAGGCATCACGGGATTCAATATTGTCAATGACATCAAAACTGCAGTAGAAAATGTTTGTCCAGGCATCGTCTCTTGTGCTGACATTCTAGCCCTTTCTTCTCGAGATGCCGTCACCTTGGCAGGAGGGCAAGGCTGGACGGTTCAATTGGGAAGAAGAGATAGTAGAACAGCTAATTTGCAAGGAGCTAGGGATAGGCTCCCAAGTCCTTTTGAGAATCTATCTCAACTTCAACAAAAGTTTAGGGATGTTCAACTTGACGATGATATCGATCTTGTTGCTCTATCAGGTGCACACACAATCGGGCGTTCGAGATGCAGATTTTTCGACGGACGGCTAAACACTTCGAACCCAGACCCGACGCTGGACTCGACGTACGCGGATCAGCTCCGGCAAAGTTGTCAGGCAGGGCGAGACACGTTCGTGAATCTGGACCCGACGACGCCGAACACGTTCGACAGGAACTACTTCACAAATCTTCAAAACGACCAAGGGCTTTTGGGAAGTGACCAAGTTCTATTCTCCACCAACGGAGCTTCAACTATCAGTACCGTCAACAACTTCGCCGGCAGCCAGAGCGCATTCTTCACCGCCTTTGCTCAGTCAATGATTAATATGGGAAATCTCAGCCCTTTGACTGGGACTAGTGGAGAAATCAGGACCAATTGCAGAAGGCTGAATTAA 963 47.04 MASFKAIIPLILCVCLMVGSVSAQLSSTFYDTTCPNVSSVVHGVVEQALQNDDRAGAKLIRLHFHDCFVDGCDGSVLLEDQDGIVSELGAPGNGGITGFNIVNDIKTAVENVCPGIVSCADILALSSRDAVTLAGGQGWTVQLGRRDSRTANLQGARDRLPSPFENLSQLQQKFRDVQLDDDIDLVALSGAHTIGRSRCRFFDGRLNTSNPDPTLDSTYADQLRQSCQAGRDTFVNLDPTTPNTFDRNYFTNLQNDQGLLGSDQVLFSTNGASTISTVNNFAGSQSAFFTAFAQSMINMGNLSPLTGTSGEIRTNCRRLN 320
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 36964018 36965650 + CaPI482276_02g024510.1 Cam02g2451 122193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2451 320 Gene3D - 29 320 - -
Cam02g2451 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam02g2451 320 FunFam Peroxidase 161 299 - -
Cam02g2451 320 ProSiteProfiles Plant heme peroxidase family profile. 24 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 Gene3D Peroxidase, domain 2 161 299 - -
Cam02g2451 320 Pfam Peroxidase 42 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cam02g2451 320 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 PANTHER PEROXIDASE 72-RELATED 14 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam02g2451 320 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cam02g2451 320 FunFam Peroxidase 28 177 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2448 Cam-Chr2:36932197 Cam02g2451 Cam-Chr2:36964018 1.10E-103 dispersed
Cam02g2449 Cam-Chr2:36945519 Cam02g2451 Cam-Chr2:36964018 2.40E-103 dispersed
Cam02g2451 Cam-Chr2:36964018 Cam11g0604 Cam-Chr11:7585411 1.30E-77 dispersed
Cam02g2450 Cam-Chr2:36954760 Cam02g2451 Cam-Chr2:36964018 5.90E-128 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2451 K00430 - csv:101212957 515.383