Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam02g2482 | ATGCTTGCTGCCATAGGGCTCGACTCTCCTCTTTCATCTCTATTCTTCGACCTTTTCTGCGTACGGAGGTGCTCAATTCCGTCTCTGGTCTCCAGCTCTTTGGCTACTCCCTTCAATTCCCAATTCAGGGTCTTCAGGGAAGGGAGATTACGCGTCCAAGGGAAGACTATGGCTGTAACAGCCCCAGGGCAGCTCAACGTTAACGAGTCTCCTTCGTGGGGATCTAGAAGTGTCGACTGCTTTGAAAAACTGGAGCAGATTGGTGAAGGCACTTATGGTCAAGTTTACATGGCCAGAGAATTAAAAACAGGTGAAATTGTTGCACTGAAGAAAATACGAATGGACAATGAGAGGGAGGGGTTCCCTATTACTGCCATACGAGAAATCAAAATTTTAAAGAAGCTTCATCATGAAAATGTAATCAAGTTGAAAGAGATCGTGACATCTCCAGGTCCTGAGAAGGATGAACAAGGGAAGCCAGATGGTAATAAGTACAAAGGTGGAATCTACATGGTTTTTGAGTACATGGACCATGATTTGACTGGTCTTGCTGATCGTCCAGGGATGAGATTTTCAGTTCCTCAAATCAAGTGTTACATGAGGCAGCTTCTCACCGGGCTTCACTATTGTCATGTAAATCAAGTACTCCATAGAGATATAAAAGGCTCAAATCTGCTTATTGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCCCGATCATTTTCTAATGATCACAATGCAAATTTAACAAATCGTGTCATTACCTTATGGTACAGACCTCCTGAATTGCTGCTTGGGTCGACCAAATATGGTCCAGCTGTGGATATGTGGTCTGTTGGTTGTATCTTTGCAGAACTTCTACATGGGAAGCCAATATTCCCTGGGAAGGATGAGCCGGAGCAATTAAATAAGATCTTTGAGCTGTGTGGTGCTCCGGATGAAGTCAATTGGCCTGGAGTTTCTAAAATCCCTTGGTACAATAATTTCAAGCCCACAAGGCCGATGAAGAGACGTCTTAGAGAAGTTTTCCGGCATTTTGATCGTCATGCTCTAGAACTGTTGGAGAAGATGCTTACGCTCGATCCTTCTCAGAGGATATCTGCCAAGGATGCCCTAGATGCGGAGTATTTTTGGACGGATCCATTACCATGTGATCCTAAAAGTTTGCCCAAGTATGAATCATCACACGAGTTCCAGACAAAGAAGAAGCGCCAACAGCAACGACAACATGAAGAAACTGCAAAGCGACAGAAGTTGCAACATCCACAGCATGCACGCCTTCCACCTATTCAGCAATCGGGGCAAGCACATGCACAGATGCGACCAGTGCCTAACCAACCAATTCATGGGTCCCAACAACCAGTTGCTGCAGGGCCTAGCCATCATTTTGGAAAGCCTCGTGGACCCCCAGGTCCTGGTAGGTATCCCGGTGGAAATCCCCCTTCTGGATACAACCACTCAAGTCGTGGTGGCGGTCAAGGTGGTTATGGTAACACACAATATGCTCAAGGACGAGGTGCTGCACCCTATGGGTCTGGTAACATGTCTGGTGCTGGTCCTCGAGGTGGAGCTGGAGGCAGCGGTGGTTATGGCGTGGGAGCTCCAAATTATCCACAGAATGGTCCATATCCTGGTAGTTCCGGTACTGGCCGTGGCTCCAATGTGATGGGTGGAAATCGCAACCAACAATATGGGTGGCAACAACAATGA | 1719 | 46.77 | MLAAIGLDSPLSSLFFDLFCVRRCSIPSLVSSSLATPFNSQFRVFREGRLRVQGKTMAVTAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMARELKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGKPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQHARLPPIQQSGQAHAQMRPVPNQPIHGSQQPVAAGPSHHFGKPRGPPGPGRYPGGNPPSGYNHSSRGGGQGGYGNTQYAQGRGAAPYGSGNMSGAGPRGGAGGSGGYGVGAPNYPQNGPYPGSSGTGRGSNVMGGNRNQQYGWQQQ | 572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 37278426 | 37285159 | - | CaPI482276_02g024820.1 | Cam02g2482 | 122224 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam02g2482 | 572 | CDD | STKc_CDK9_like | 81 | 380 | - | - | |
Cam02g2482 | 572 | FunFam | Cyclin-dependent kinase C-2 | 68 | 177 | - | - | |
Cam02g2482 | 572 | MobiDBLite | consensus disorder prediction | 429 | 456 | - | - | |
Cam02g2482 | 572 | MobiDBLite | consensus disorder prediction | 484 | 503 | - | - | |
Cam02g2482 | 572 | MobiDBLite | consensus disorder prediction | 543 | 572 | - | - | |
Cam02g2482 | 572 | PANTHER | CELL DIVISION PROTEIN KINASE | 81 | 380 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cam02g2482 | 572 | ProSiteProfiles | Protein kinase domain profile. | 81 | 380 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g2482 | 572 | SUPERFAMILY | Protein kinase-like (PK-like) | 75 | 388 | IPR011009 | - | |
Cam02g2482 | 572 | MobiDBLite | consensus disorder prediction | 391 | 572 | - | - | |
Cam02g2482 | 572 | Pfam | Protein kinase domain | 81 | 380 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g2482 | 572 | SMART | serkin_6 | 81 | 380 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam02g2482 | 572 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 177 | - | - | |
Cam02g2482 | 572 | MobiDBLite | consensus disorder prediction | 393 | 422 | - | - | |
Cam02g2482 | 572 | FunFam | Cyclin-dependent kinase C-2 | 178 | 420 | - | - | |
Cam02g2482 | 572 | ProSitePatterns | Protein kinases ATP-binding region signature. | 87 | 110 | IPR017441 | GO:0005524(InterPro) | |
Cam02g2482 | 572 | Gene3D | Transferase(Phosphotransferase) domain 1 | 178 | 420 | - | - | |
Cam02g2482 | 572 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 215 | 227 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g2482 | Cam-Chr2:37278426 | Cam10g1268 | Cam-Chr10:26129379 | 1.00E-271 | dispersed | |
Cam02g2482 | Cam-Chr2:37278426 | Cam04g1236 | Cam-Chr4:26386648 | 5.00E-93 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85016 | PF00069 | Pkinase | 5.50E-75 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam02g2482 | K08819 | - | csv:101220936 | 983.4 |