Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam02g2496 ATGAATCATCTGATCAGTCTCTTTAAGAGTATGCTTGGCCGAATAGAAGTTAGGGGAGTGGAGTCAACTCCACTCCTTGCTTTGCTTAACCGCAACCATCGAAGCCCTGTGATCCGATTCTTCTCTCTTCCTTTGGAAATGCCGACCAGTTTGGTCCCTTCTCACAGACCGGAGCTTCTCACCGTCGCCGTCGCTGTGGTTGCTGTCGGCGTTGCCACTGCCTACTATTTCTATATCACCAAGAAATCCAAACCCAAAGGTTGCTTGGACCCTAATAACTTCAAGGAATTTAAACTAGTTAAACGCACACAGCTTAGCCATAATGTAGCAAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAATTTTGGGTCTGCCGATTGGGCAGCATATCAGCTGCAGAGGAAAAGATAGCGAAGGTGGAGATGTTGTGAAACCTTACACTCCAACCACTTTGGACACAGATGTTGGATACTTTGATTTGGTCATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTCCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCAAAGGGGATCTTGGATTTGGCCTAA 591 46.7 MNHLISLFKSMLGRIEVRGVESTPLLALLNRNHRSPVIRFFSLPLEMPTSLVPSHRPELLTVAVAVVAVGVATAYYFYITKKSKPKGCLDPNNFKEFKLVKRTQLSHNVAKFRFSLPTPTSILGLPIGQHISCRGKDSEGGDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGILDLA 196
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 37357660 37360141 - CaPI482276_02g024960.1 Cam02g2496 122238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam02g2496 196 FunFam NADH-cytochrome b5 reductase 87 186 - -
Cam02g2496 196 SUPERFAMILY Riboflavin synthase domain-like 88 191 IPR017938 -
Cam02g2496 196 Gene3D Translation factors 84 189 - -
Cam02g2496 196 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 92 196 IPR017927 GO:0016491(InterPro)
Cam02g2496 196 PRINTS Cytochrome B5 reductase signature 123 134 - -
Cam02g2496 196 PRINTS Cytochrome B5 reductase signature 145 152 - -
Cam02g2496 196 PRINTS Cytochrome B5 reductase signature 181 195 - -
Cam02g2496 196 Pfam Oxidoreductase FAD-binding domain 97 192 IPR008333 -
Cam02g2496 196 CDD cyt_b5_reduct_like 97 191 - -
Cam02g2496 196 PANTHER NADH-CYTOCHROME B5 REDUCTASE 63 191 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2496 Cam-Chr2:37357660 Cam02g2500 Cam-Chr2:37372985 1.30E-98 dispersed
Cam02g2493 Cam-Chr2:37341556 Cam02g2496 Cam-Chr2:37357660 2.90E-98 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam02g2496 K00326 - csv:101219272 253.447