Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0003 ATGAATAATAAAGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGCCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCGACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTGGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCACGGTTTCTCTCACGATCCTGGAAATACCACATACTTTAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAACTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGCAGCCGGACATTTGCACCTTCCCCCTTTTTCCCTTTTCATTCTTCGTCATATCTCCCTGACTCCCTCTCTCTACAACAACCCACGCCCGTACGCATCCATCGGGAACACTTTTTCTTTCATTTCTCCCCCATCTTCCTCTCTGCTGAACCGCGCCGGCACCCCGTTCCTTGTTTTGCTGCAGCCGCACCGCATTCTTTTACAACTCTAATCGTCGAGGTTCAATGGGAAAGAACCTGGATGGTCATAGAAAAGCCATGGGATGAGATACTTGAACACGAGAGAACCATGGCAGATGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCCACTAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCGACTGATGAGGTTGTTGATAAGTTAGCGGAGAAAACTGAAAGTTTGTCTGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGATGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGAGCGCGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAATATTCTTAGAGAGAATAATCCAGAACTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCACCGGCAGCCAGATCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATACGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCGGACACTATCCTTTCAAAGGAGAACCGACTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGATTTGTGGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 1833 43.1 MNNKVAANQLDRLPSQNKGSRRVAFSDSLPKHRPTSNDSNSEHCNKCCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIHGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMFPNLSSRTFAPSPFFPFHSSSYLPDSLSLQQPTPVRIHREHFFFHFSPIFLSAEPRRHPVPCFAAAAPHSFTTLIVEVQWERTWMVIEKPWDEILEHERTMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDEVVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1059047 1072169 + CaPI482276_03g000030.1 Cam03g0003 122269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0003 610 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 365 596 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Cam03g0003 610 MobiDBLite consensus disorder prediction 17 43 - -
Cam03g0003 610 Pfam Late embryogenesis abundant protein 120 220 IPR004864 -
Cam03g0003 610 FunFam Eukaryotic translation initiation factor 2 subunit 453 595 - -
Cam03g0003 610 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 559 594 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam03g0003 610 SMART eIF2Bneu4 480 589 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam03g0003 610 MobiDBLite consensus disorder prediction 402 439 - -
Cam03g0003 610 MobiDBLite consensus disorder prediction 420 434 - -
Cam03g0003 610 MobiDBLite consensus disorder prediction 402 416 - -
Cam03g0003 610 Gene3D - 453 595 - -
Cam03g0003 610 Pfam Domain found in IF2B/IF5 479 588 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Cam03g0003 610 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 455 562 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0003 K03238 - csv:101220978 519.62