Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam03g0003 | ATGAATAATAAAGTTGCTGCTAATCAACTTGATCGACTTCCAAGCCAAAACAAAGGATCACGCCGGGTGGCGTTCTCCGATTCCCTTCCTAAACACCGACCGACATCCAACGATAGTAACTCTGAGCATTGCAACAAATGTTGTTGTCCTCGTTTATTTGCTTGTTGCGCTTGGATTTGTCTTGGGGTTTTCGGAATTGTTGTTGCCATTCTTATCCTTGGCGTAATATTTATGTCCTTCCTTCAATCAGGATTGCCAGAAATCACCGTAAGAATGTTGAACTTGTCCAAATTCGAGATTGGAAATTCCACAAATCAGAATAATGTTGTGTTAAATGCAAAAGTAGATATGTCAATCGAGATGAGGAACAAGAACGAAAAAATAGAGTTGAGTTATAGCAATATTGTGGTGAATTTGGCGTCAGAAGATGTGAAATTGGGAAGGAGTGTGATTCACGGTTTCTCTCACGATCCTGGAAATACCACATACTTTAATGTAACTATGAATGTTGTGGGAGATTCCACAGATAAAGACAATGTATTGCAACTAGAAGATGATCGAAAAAGGGTGCAAATGAATGTGCATGTGACAATGGAGGCTACAGTTGATTTTCATGTTGGGATATTCAAATTGAACAAGGTGCCAATCCATGTAGCATGTGATTTTCGACAGTTCCTTCTTTTATATCGAATAAACGAGCCCCCATGTAATATTAGAATGTTTCCCAACCTCAGCAGCCGGACATTTGCACCTTCCCCCTTTTTCCCTTTTCATTCTTCGTCATATCTCCCTGACTCCCTCTCTCTACAACAACCCACGCCCGTACGCATCCATCGGGAACACTTTTTCTTTCATTTCTCCCCCATCTTCCTCTCTGCTGAACCGCGCCGGCACCCCGTTCCTTGTTTTGCTGCAGCCGCACCGCATTCTTTTACAACTCTAATCGTCGAGGTTCAATGGGAAAGAACCTGGATGGTCATAGAAAAGCCATGGGATGAGATACTTGAACACGAGAGAACCATGGCAGATGAAGTTCAGAATGATGTGAATGATCAGGTGGCAGATATTGCCCCCTTTGATCCCACTAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCGACTGATGAGGTTGTTGATAAGTTAGCGGAGAAAACTGAAAGTTTGTCTGTTTCTGATGGTTTGGAGACTACCACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCTAGCTCCTTGAATGATGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGAGCGCGAGGGAATTGTTCTACAATATCGTTATCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAATATTCTTAGAGAGAATAATCCAGAACTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCACCGGCAGCCAGATCATGTTATGGCTTTCTTACTAGCCGAACTGGGAACCAGTGGCTCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTCGAAGGAATTCTGCGTCGATACGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCGGACACTATCCTTTCAAAGGAGAACCGACTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGATTTGTGGCTCGTGTTGGCCGGAGGAACACTGGGACATGA | 1833 | 43.1 | MNNKVAANQLDRLPSQNKGSRRVAFSDSLPKHRPTSNDSNSEHCNKCCCPRLFACCAWICLGVFGIVVAILILGVIFMSFLQSGLPEITVRMLNLSKFEIGNSTNQNNVVLNAKVDMSIEMRNKNEKIELSYSNIVVNLASEDVKLGRSVIHGFSHDPGNTTYFNVTMNVVGDSTDKDNVLQLEDDRKRVQMNVHVTMEATVDFHVGIFKLNKVPIHVACDFRQFLLLYRINEPPCNIRMFPNLSSRTFAPSPFFPFHSSSYLPDSLSLQQPTPVRIHREHFFFHFSPIFLSAEPRRHPVPCFAAAAPHSFTTLIVEVQWERTWMVIEKPWDEILEHERTMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDEVVDKLAEKTESLSVSDGLETTTFSGLKKKKKKPVEASSLNDDGADATEDLEDQAGENEEREGIVLQYRYPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT | 610 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1059047 | 1072169 | + | CaPI482276_03g000030.1 | Cam03g0003 | 122269 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam03g0003 | 610 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 365 | 596 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER) | |
Cam03g0003 | 610 | MobiDBLite | consensus disorder prediction | 17 | 43 | - | - | |
Cam03g0003 | 610 | Pfam | Late embryogenesis abundant protein | 120 | 220 | IPR004864 | - | |
Cam03g0003 | 610 | FunFam | Eukaryotic translation initiation factor 2 subunit | 453 | 595 | - | - | |
Cam03g0003 | 610 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 559 | 594 | IPR016190 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cam03g0003 | 610 | SMART | eIF2Bneu4 | 480 | 589 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cam03g0003 | 610 | MobiDBLite | consensus disorder prediction | 402 | 439 | - | - | |
Cam03g0003 | 610 | MobiDBLite | consensus disorder prediction | 420 | 434 | - | - | |
Cam03g0003 | 610 | MobiDBLite | consensus disorder prediction | 402 | 416 | - | - | |
Cam03g0003 | 610 | Gene3D | - | 453 | 595 | - | - | |
Cam03g0003 | 610 | Pfam | Domain found in IF2B/IF5 | 479 | 588 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cam03g0003 | 610 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 455 | 562 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam03g0003 | K03238 | - | csv:101220978 | 519.62 |