Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam03g0006 | ATGAGAGCGGGCTTGTCCAATGCTAGCTGCGGCTACCGCTGCCGTGATTCGTGCATGGTCCCGGAGGGTCGAGAGACGGAACTCCCTACTTCGGAGTCCTCTCTGTCGAACTATGAACACTTTTTAGGACCTTTCGAGAGCACTGGAGCAAGCAACAGGGTATACATCATCTGCTTGAATTTTTGTACATCCAAGAGCTACACCATGGATCTTGTCCTGTTGGAGAAGGCTCTAGTGGGGATCTTCGTGGCCATGGTTGTTGCCATTAGCATATCCAAATTGAGGGGCAAGCGTTTTAAACTCCCACCAGGTCCCATTCCCATCCCCATATTTGGGAATTGGCTGCAGGTTGGGGATGACTTGAACCACCGCAACTTGACGGAGCTGGCCAAAAAGTTCGGTGACATATTGCTGTTGAGAATGGGGCAACGAAACTTGGTGGTGATTTCTTCACCAGAGTTGGCCAAGGAAGTGCTACACACCCAAGGAGTAGAATTTGGGTCTAGGACAAGAAACGTGGTGTTCGATATCTTCACAGATAAGGGTCAAGATATGGTGTTCACGGTGTACGGCAAGCACTGGATGAAAATGAGGCGAATCATGACCATTCCTTTTTTCACCAATAAGGTGGTTCAGCAGAACAGGTTTAGTTGGGAGGACGAGGCTGCCAGAGTTGTGGAGGATCTAAAGAATAACCCAGAAGCCTCAACCACCGGCGTGGTTCTGAGGAAGCGGCTACAGCTTCTAATGTATAACAATATGTACAGAATGATGTTTGACAAGAGATTCGACAGCATGGAAGACCCTCTGTTCAACAACCTTAAGCATATAAACGCAGAGAGGAGTCGACTATCTCAGAGCTTTGAATACAACTATGGTGATTTCATCCCCATACTCAGGCCTTTCCTTAGAGGCTATTTGAATGTGTGTAAGGATGTCAAAGAGAGGAGGCTCAAGCTCTTCAAAGACCATTTTGTCGATGAGAGGAGGAGACTAACTAGCACCATGAGCAACAAGGAGGATGGTGTAAAATGTGGCATTGATCATATTGTGGAGGCTCAAGAGAATGGTGAGATCACCGAAGACAATGTTCTCTTCATTGTTGAGAATATCAACGTTGCTGCTATTGAGACAACATTGTGGTCAATGGAGTGGGCTATTGCGGAGCTAGTTAACCACCCCAACATCCAGAAAAAGCTGAGGGACGAGCTCGATTTGGTGCTCGGATATGGCGTCCAAATTACGGAGCCTGACATTCGCAATCTACCTTACTTGCAGGCTGTCATCAAGGAGACTTTGCGGTTAAGAATGGCCATTCCTTTGTTAGTGCCTCACATGAATCTCCAAGACGCCAAGTTGGCTTCTTATGACATCCCGGCAGAAAGCAAGATTCTAGTGAATGCATGGTGGCTGGCCAACAACCCTGATCACTGGAACAAACCTCAAGAATTTCGACCTGAGAGGTTTTTGGAGGAGGAGCAACATGTAGATCCTATAGGGAATGACTTTAGATACCTTCCTTTCGGTGCCGGAAGGAGGAGCTGCCCTGGCATTGTTCTTGCCTTGCCCATCGTTGCTATTACTTTGGGTCGTCTCATTCAAAATTTTGAGCTACTGCCTCCTCTTGGACACTCCAAAATTGATACCACCGAAAAGCCTGGACAGTTCAGCTTGCAAATATTCAACCACTCTACTATTGTGGCAAAGTCAAGGTCTTTATGA | 1722 | 47.04 | MRAGLSNASCGYRCRDSCMVPEGRETELPTSESSLSNYEHFLGPFESTGASNRVYIICLNFCTSKSYTMDLVLLEKALVGIFVAMVVAISISKLRGKRFKLPPGPIPIPIFGNWLQVGDDLNHRNLTELAKKFGDILLLRMGQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTDKGQDMVFTVYGKHWMKMRRIMTIPFFTNKVVQQNRFSWEDEAARVVEDLKNNPEASTTGVVLRKRLQLLMYNNMYRMMFDKRFDSMEDPLFNNLKHINAERSRLSQSFEYNYGDFIPILRPFLRGYLNVCKDVKERRLKLFKDHFVDERRRLTSTMSNKEDGVKCGIDHIVEAQENGEITEDNVLFIVENINVAAIETTLWSMEWAIAELVNHPNIQKKLRDELDLVLGYGVQITEPDIRNLPYLQAVIKETLRLRMAIPLLVPHMNLQDAKLASYDIPAESKILVNAWWLANNPDHWNKPQEFRPERFLEEEQHVDPIGNDFRYLPFGAGRRSCPGIVLALPIVAITLGRLIQNFELLPPLGHSKIDTTEKPGQFSLQIFNHSTIVAKSRSL | 573 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1077801 | 1081059 | + | CaPI482276_03g000060.1 | Cam03g0006 | 122272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam03g0006 | 573 | Gene3D | Cytochrome P450 | 92 | 566 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 508 | 517 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam03g0006 | 573 | Pfam | Cytochrome P450 | 102 | 559 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | SUPERFAMILY | Cytochrome P450 | 102 | 557 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 69 | 571 | - | GO:0004497(PANTHER)|GO:0009808(PANTHER)|GO:0016710(PANTHER) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 467 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 426 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 249 | 267 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 130 | 149 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 154 | 175 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 363 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 515 | 538 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 505 | 515 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | E-class P450 group I signature | 383 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | CDD | CYP73 | 131 | 564 | - | - | |
| Cam03g0006 | 573 | PRINTS | P450 superfamily signature | 374 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | P450 superfamily signature | 506 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | PRINTS | P450 superfamily signature | 427 | 438 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam03g0006 | 573 | FunFam | Trans-cinnamate 4-monooxygenase | 91 | 565 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam03g0006 | Cam-Chr3:1077801 | Cam11g1164 | Cam-Chr11:22778958 | 7.50E-182 | dispersed | |
| Cam02g1967 | Cam-Chr2:32787629 | Cam03g0006 | Cam-Chr3:1077801 | 3.70E-241 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam03g0006 | K00487 | - | csv:101208511 | 917.531 |