Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0022 ATGGAATCAAAGTGTAGCAAGTTATGGTGTGCTTTGGTGTTTGCTTCTTTGATAACTCTAAGCTCTGGCAGTTTATCCGCTACCTACTATAAGAGTTCATGTCCAAAGTTACTCTCCATTGTTCGACGTGAAGTCGTGAAAGCAGTGGACAAAGAGTACAGAATGGGAGCATCGTTGCTTCGCCTCCATTTTCACGACTGCTTTGTCAATGGATGTGATGCGTCGGTGCTATTGGACGACACGTCAAACTTCACTGGAGAAAAGACGGCAATCCCAAACAAAGATTCGTTGAGAGGTTTTGAAGTGATCGACTCAATTAAAACGCTAGTGGAAGCTGCTTGTCCTTCTGTAGTTTCTTGTGCTGATATTTTGTCCCTTGCAGCCCGAGACTCGGTGGTTACCCTTGGGGGGCCTTCGTGGGTAGTTGGGCTTGGGCGGAGGGACTCGACCACAGCCAGCTTCGACAGCGCAAACAATGATCTTCCTTCTCCCTTCCTCGACCTTCCCGATCTCATCTCTGCCTTTTCCAACAAAGGCTTCGACACCAAAGAATTGGTCGCCCTTTCAGGATCTCACACGATCGGACAAGCCAGGTGCTCCATGTTCAGAGTAAGAGCCCATAACGAAACCACCACCATTGATTCAGAGTTTGCAGCCTCTCTAAGATCCAATTGCCCTTTCTCCGGCGACGACCAAAGTCTTTCTCCTTTGGATCTCAAAACCCAATCCTTATTCGACAATGCTTATTTCAAGAACTTGGTCCAAAACAAAGGCCTTCTTCATTCCGACCAAGCCCTCTTCAGCAACTCCTCCGCCGATTCTCATGTCACTTCCTATGTCTCCGACTCTTCTGCTTTCTTCTCCGACTTCGCCGCCGCCATGGTTAAGATGTCCAACCTCTCCCCACTCACCGGCTCCGACGGCCAGATTCGTTCCGACTGCCGCAAAATTAACTAA 957 48.8 MESKCSKLWCALVFASLITLSSGSLSATYYKSSCPKLLSIVRREVVKAVDKEYRMGASLLRLHFHDCFVNGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDSIKTLVEAACPSVVSCADILSLAARDSVVTLGGPSWVVGLGRRDSTTASFDSANNDLPSPFLDLPDLISAFSNKGFDTKELVALSGSHTIGQARCSMFRVRAHNETTTIDSEFAASLRSNCPFSGDDQSLSPLDLKTQSLFDNAYFKNLVQNKGLLHSDQALFSNSSADSHVTSYVSDSSAFFSDFAAAMVKMSNLSPLTGSDGQIRSDCRKIN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1238973 1240926 + CaPI482276_03g000220.1 Cam03g0022 122288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0022 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 FunFam Peroxidase 28 164 - -
Cam03g0022 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 Gene3D Peroxidase, domain 2 162 297 - -
Cam03g0022 318 FunFam Peroxidase 162 297 - -
Cam03g0022 318 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PANTHER PEROXIDASE 72-RELATED 14 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam03g0022 318 Gene3D - 28 318 - -
Cam03g0022 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cam03g0022 318 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2442 Cam-Chr2:36883037 Cam03g0022 Cam-Chr3:1238973 6.90E-83 dispersed
Cam03g0022 Cam-Chr3:1238973 Cam07g0267 Cam-Chr7:3743464 2.00E-91 dispersed
Cam08g1797 Cam-Chr8:24130093 Cam03g0022 Cam-Chr3:1238973 4.40E-17 dispersed
Cam11g0604 Cam-Chr11:7585411 Cam03g0022 Cam-Chr3:1238973 3.40E-99 wgd
Cam02g1978 Cam-Chr2:32895995 Cam03g0022 Cam-Chr3:1238973 1.80E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0022 K00430 - csv:101221157 560.451