Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0032 ATGTCGACCACCCACGACCCCCAACTGGTCTGCGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTCCTCCTCCGCGGCTACTCCGTTCACGCCACCCTCCAAAATCTCAAGGACGAGAGCGAAACCAAGCATCTGGAAGATTTAGAGGGAGCAGATGCTCGTCTTCGTCTCTTCCAAATCGACCTCCTCGATTATGACTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGCGTCTTCCACGTCGCGTCTCCTTGCATCGTTGATCCTGTACAAGATCCTGAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCCAAGGAGGCTGGGGTACAACGCGTAGTGGTGACTTCTTCTATCTCAGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAATGTTGGACCGATATTGATTACTGCAAGAAAAAGGGGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCTAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTGATGGGCCCTGTGTTTCCTCCCAGAATTAATGCCAGCATGCAAATGCTTTTAAAACTTCTTCAGGGGTGCAGTGAGACATTCGAGGACGTTTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTCTATGAAAACAAATCAGCTACAGGAAGGCACTTTTGTGCTGAGGCCATAGCTCGTTACTCTGACTATGTAGCGAAGGCTGCTGAACTCTTCCCTCAGTATAATGTCCCCAGATCGGTAGAAGATACACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCCAAGAAGTTGATGAACCTGGGGCTGGAATTCATCCCAATGGAACAAATTCTCAAGGAAGCCGTTGAGGATCTAAAAAAGAAGGGATATATTTCCTGA 978 48.77 MSTTHDPQLVCVTGASGCIGSWLVHLLLLRGYSVHATLQNLKDESETKHLEDLEGADARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDPVQDPERDLLDPAIKGTINVLTAAKEAGVQRVVVTSSISAMIPNPNWPANVVRNEECWTDIDYCKKKGLWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLQGCSETFEDVFIGVVHFKDVALAHILVYENKSATGRHFCAEAIARYSDYVAKAAELFPQYNVPRSVEDTQPDLVRAKDGAKKLMNLGLEFIPMEQILKEAVEDLKKKGYIS 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1288112 1290596 + CaPI482276_03g000320.1 Cam03g0032 122298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0032 325 CDD FR_SDR_e 10 302 - -
Cam03g0032 325 Pfam NAD dependent epimerase/dehydratase family 10 251 IPR001509 -
Cam03g0032 325 Gene3D - 2 325 - -
Cam03g0032 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 316 IPR050425 GO:0016616(PANTHER)
Cam03g0032 325 FunFam Cinnamoyl-CoA reductase 1 3 325 - -
Cam03g0032 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 319 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0032 Cam-Chr3:1288112 Cam10g0714 Cam-Chr10:11731215 1.20E-91 dispersed
Cam03g0032 Cam-Chr3:1288112 Cam09g0326 Cam-Chr9:3619736 6.70E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0032 - - - 0.0