Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0058 ATGAACAACCCATCACAGGAAAATGTTGAAACAGAAGGCATCTCTCCAAAGAATGTGAAGAATGAGTCCTACAGAAGTGTGCTTATGTTGGCTTACCAAAGTCTAGGAGTTGTTTATGGGGACCTCAGCACCTCCCCTCTCTATGTCTACAAAACCACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAGATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGACGATAATGGTGAAGGGGGTACCTTTGCACTGTACTCTCTTCTCTGTAGGCATGCTAGATTATGCATATTACCGAATCAAGAGCCTGTAGATGAACAGTTATCAGCATATGACATCAAGGGAATCTCGGAGACAAGGCCGAGTGCTGCTCTAAAGTCTTTTTTTCGGCTGCATCCATCTTTTCGAAGAGGTTTTTTGTTGTTTGTTCTCTTCGGAACCTGCATGGCTATTGGTGATGGAGTGCTTACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCACTGGACTCCATGAGAATTACGTTGTTTTAATCTCGTGCGTCATCTTAGTTGGACTATTCTCCCTCCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATCACGGTGTGGCTTGTCTGTATTAGTGTCATCGGAATGTATAATATTATCAAATGGAACCCAAGTATTTATCACGCACTCTCTCCAGTTTATATGCTGAAATTCCTTCGAAGCACAGGTGTTGAAGGTTGGATTTCATTAGGTGGAATTGTTCTCTCCATAACAGGTGTGGAGGCAATGTTTGCTGATTTAGGCCACTTCTCTTCACTTTCGATCAAGATTGCCTTCACATTTCTTGTATATCCCTCCTTGATACTTGCTTATTTGGGTGAGGCTGCATTTCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCAGTGTTCGTCGTGGCCACTTTTGCTTCTGTCGTAGGAAGTCAGGCAGTGATTTCGGCTACATTCTCCCTTGTAAACCAGTGCTGTGCTCTAAATTGTTTCCCCCATGTGAAAACTATGCACACTTCGAATCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGCTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAACATGATAGGCCATGCATATGGGCTGGCAGTCACCATTGTTATGTTTGTCTCAACTTGCTTGATGACACTTGTGATGATAATTGTTTGGAAGCAGAGGTTGATCAATGCCATAGCATTTTTCATGTTTTTTGGGTCGATTGAACTACTTTACATCTCTGCATCAATTGTCAAAGTGCATGAAGGCGGTTGGATCCCTCTCGTGTTTTCTACTATCTTTATGTGTTCGATGTATGCATGGTACTATGGGACGATGAAGAAACACGAATACGACGATGAGAACAAAGTGTCGATGAATAGGATACTTTCTTCAGGGCCTAGCCTTGGCATAGTGCATGTGCCCGGAATTGGACTCATATACACTAATCTGGTCGCTGGTGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATAAAATACGTTCAAGTTCCCCATATTGACGAAGAAGATCGTTTGCTCATTTCGAGGGTGGGGCCGAAAGAATGCAACATGTTTCGGTGCATTGTCCGGTATGGTTACAGGGATTTGCTACAAGAGAACTACAATTTCGAGAACAGATTGGTGTTTTCCTTAGTGCATTATGTAGAAACAGAAGATCACTTTTGGAAACCAATGGCACAAGTCTCTAGAGGGTGTGAAAATTCAGAAGAACCTTGTGAATATGAACCATTGGAGCAGGCTTTTACAAGCTCAAATATGTTGCAGTCTTCTAACAAATATCAAGCAACGGATACTGCAGTCGACGACCGGGAAAAGTCTATACATAATGAGGAAGCGATGCAGATATTGAGAGCGAAAGAATCGGGAATCACGTACATCTTTGGACATTGCTCAGTCAAGGCCAAGAAATCATCTTCCATTTTCAAGAAGTTAGCCATTGATATTGTGTATGCTTTTTTGAAACAAAATTGTAGAGAGCCTGAGGTTTTACTGAATGTGCCTCACACTTCTCTCTTGGAAGTAGGCATGGTATATTATGTATAG 2274 41.64 MNNPSQENVETEGISPKNVKNESYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSADDNGEGGTFALYSLLCRHARLCILPNQEPVDEQLSAYDIKGISETRPSAALKSFFRLHPSFRRGFLLFVLFGTCMAIGDGVLTPAISVLSAVSGVKHKITGLHENYVVLISCVILVGLFSLQHRGTHKVAFMFAPIITVWLVCISVIGMYNIIKWNPSIYHALSPVYMLKFLRSTGVEGWISLGGIVLSITGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVVGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTNMIGHAYGLAVTIVMFVSTCLMTLVMIIVWKQRLINAIAFFMFFGSIELLYISASIVKVHEGGWIPLVFSTIFMCSMYAWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVHVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLISRVGPKECNMFRCIVRYGYRDLLQENYNFENRLVFSLVHYVETEDHFWKPMAQVSRGCENSEEPCEYEPLEQAFTSSNMLQSSNKYQATDTAVDDREKSIHNEEAMQILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIVYAFLKQNCREPEVLLNVPHTSLLEVGMVYYV 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1525942 1530520 - CaPI482276_03g000580.1 Cam03g0058 122324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0058 757 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 757 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam03g0058 757 NCBIfam potassium uptake protein 30 757 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam03g0058 757 Pfam K+ potassium transporter integral membrane domain 30 521 IPR053951 -
Cam03g0058 757 Pfam K+ potassium transporter C-terminal domain 532 755 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0058 Cam-Chr3:1525942 Cam05g1395 Cam-Chr5:15789163 8.50E-234 dispersed
Cam03g0058 Cam-Chr3:1525942 Cam09g1936 Cam-Chr9:34047979 2.80E-229 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0058 K03549 - csv:101222845 1425.99