Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g0062 ATGTCTGTCTCCGTTGCGGTTTCGAATTCGCCGGGATTTTCTCCTTCGTCTATGTTCTGCAACAAGACGTCGATCATTTCTCCGGCGCCGGAGGCGCTCACGCTTACTTTAGCCCATTTAAAGTCGTCGCAGGCTTCTTCGTCTTGCTCTTCTTCCCCTTCTTCGCCTTCTTCCCCTTTTCGGATTAGGTTTCCCAAGCCCCCTTCTGGGCTTTCGGCGGCAGCGGCAGCGGTGGCGGTGGCTTCCACTTCTTCTCCTTCGTCGTCGTCGTCAAGCGCGATCTTGAAGAGGAAGAGACCGGCTAGGTTGGATATTCCGTTGACACCATTGAGTTTTGGGGCTCCGGTGATGCCGTCGCCATCGTCGTTCAGGGAGGTGGTGGAGGCCGAGAGAGATGGGTATTCTGTGTATTGTAAGAGAGGGAGGAGGAGAATTGCGATGGAAGATCGCTATTCTGCCGCTATTGATCTTCGAGGAAATTCCAAAGAGGGGTTTTTTGGTGTATTTGATGGACATGGAGGTGCGAAGGCTGCAGAATTTGCAGCAAATAACTTAGAGAAGAACGTTATGAATGAAATTGAAAGACTGGCTGATAATGAAACTGATTTTGAACAAGCCATTAAACATGGCTACCTCACCACAGATTCCGATTTCCTCAAGGAGGATCAACGTGGTGGTTCATGTTGTGTGACAGCCTTGATCAAGAAAGGCAACCTTGTTATCTCCAACGCCGGTGACTGCCGTGCCGTTCTCAGCAGCCAAGGTGTTGCCGAGGCCATCACCTCCGACCACCGCCCGTCTCGGGAAGATGAAAGGCGCAGGATCGAGTCCACGGGTGGATATGTTGATTTGTGCAATGGCATTTGGAGAGTCCAGGGATCTCTAGCTGTAACTAGAGCAATTGGGGATGCTCACCTCAAACAATGGGTGATAGCAGAGCCGGAGACGAGGGCAATTCGGATCGAACCTCGACACGAGTTCTTGATCTTGGCCTCAGACGGATTATGGGAAACGGTGAGCAATCAAGAAGCAGTGGACATTGCACATCCGTTGTGTGTGGGGATTGAGAAGGCAGAGCCATTGGTGGCCTGTAAAAAGCTTGTGGAGCTCTCACTTTCAAGAGGTTCAGTTGATGACATTAGTGTAGTACTGATTCAGTTGGCTAACTTCATCTAA 1176 50.68 MSVSVAVSNSPGFSPSSMFCNKTSIISPAPEALTLTLAHLKSSQASSSCSSSPSSPSSPFRIRFPKPPSGLSAAAAAVAVASTSSPSSSSSSAILKRKRPARLDIPLTPLSFGAPVMPSPSSFREVVEAERDGYSVYCKRGRRRIAMEDRYSAAIDLRGNSKEGFFGVFDGHGGAKAAEFAANNLEKNVMNEIERLADNETDFEQAIKHGYLTTDSDFLKEDQRGGSCCVTALIKKGNLVISNAGDCRAVLSSQGVAEAITSDHRPSREDERRRIESTGGYVDLCNGIWRVQGSLAVTRAIGDAHLKQWVIAEPETRAIRIEPRHEFLILASDGLWETVSNQEAVDIAHPLCVGIEKAEPLVACKKLVELSLSRGSVDDISVVLIQLANFI 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1570863 1572401 - CaPI482276_03g000620.1 Cam03g0062 122328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g0062 391 SMART PP2C_4 126 385 IPR001932 -
Cam03g0062 391 CDD PP2Cc 133 387 IPR001932 -
Cam03g0062 391 ProSiteProfiles PPM-type phosphatase domain profile. 133 387 IPR001932 -
Cam03g0062 391 FunFam probable protein phosphatase 2C 25 126 390 - -
Cam03g0062 391 SMART PP2C_SIG_2 142 387 IPR001932 -
Cam03g0062 391 Pfam Protein phosphatase 2C 138 380 IPR001932 -
Cam03g0062 391 SUPERFAMILY PP2C-like 133 388 IPR036457 -
Cam03g0062 391 Gene3D - 134 390 IPR036457 -
Cam03g0062 391 Coils Coil 182 202 - -
Cam03g0062 391 ProSitePatterns PPM-type phosphatase domain signature. 165 173 IPR000222 GO:0043169(InterPro)
Cam03g0062 391 PANTHER PROTEIN PHOSPHATASE 121 385 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0062 Cam-Chr3:1570863 Cam07g0443 Cam-Chr7:6121747 1.50E-93 dispersed
Cam03g0062 Cam-Chr3:1570863 Cam05g1043 Cam-Chr5:9434930 6.50E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g0062 K17506 - csv:101207841 660.218